Literature DB >> 19652178

The mother enrichment program: a genetic system for facile replicative life span analysis in Saccharomyces cerevisiae.

Derek L Lindstrom1, Daniel E Gottschling.   

Abstract

The replicative life span (RLS) of Saccharomyces cerevisiae has been established as a model for the genetic regulation of longevity despite the inherent difficulty of the RLS assay, which requires separation of mother and daughter cells by micromanipulation after every division. Here we present the mother enrichment program (MEP), an inducible genetic system in which mother cells maintain a normal RLS--a median of 36 generations in the diploid MEP strain--while the proliferative potential of daughter cells is eliminated. Thus, the viability of a population over time becomes a function of RLS, and it displays features of a survival curve such as changes in hazard rate with age. We show that viability of mother cells in liquid culture is regulated by SIR2 and FOB1, two opposing regulators of RLS in yeast. We demonstrate that viability curves of these short- and long-lived strains can be easily distinguished from wild type, using a colony formation assay. This provides a simplified screening method for identifying genetic or environmental factors that regulate RLS. Additionally, the MEP can provide a cohort of cells at any stage of their life span for the analysis of age-associated phenotypes. These capabilities effectively remove the hurdles presented by RLS analysis that have hindered S. cerevisiae aging studies since their inception 50 years ago.

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Year:  2009        PMID: 19652178      PMCID: PMC2766306          DOI: 10.1534/genetics.109.106229

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  40 in total

Review 1.  Large-scale identification in yeast of conserved ageing genes.

Authors:  Matt Kaeberlein; Brian K Kennedy
Journal:  Mech Ageing Dev       Date:  2005-01       Impact factor: 5.432

2.  A method for high-throughput quantitative analysis of yeast chronological life span.

Authors:  Christopher J Murakami; Christopher R Burtner; Brian K Kennedy; Matt Kaeberlein
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2008-02       Impact factor: 6.053

3.  Mechanisms of haploinsufficiency revealed by genome-wide profiling in yeast.

Authors:  Adam M Deutschbauer; Daniel F Jaramillo; Michael Proctor; Jochen Kumm; Maureen E Hillenmeyer; Ronald W Davis; Corey Nislow; Guri Giaever
Journal:  Genetics       Date:  2005-02-16       Impact factor: 4.562

4.  Extension of chronological life span in yeast by decreased TOR pathway signaling.

Authors:  R Wilson Powers; Matt Kaeberlein; Seth D Caldwell; Brian K Kennedy; Stanley Fields
Journal:  Genes Dev       Date:  2006-01-15       Impact factor: 11.361

5.  Regulation of yeast replicative life span by TOR and Sch9 in response to nutrients.

Authors:  Matt Kaeberlein; R Wilson Powers; Kristan K Steffen; Eric A Westman; Di Hu; Nick Dang; Emily O Kerr; Kathryn T Kirkland; Stanley Fields; Brian K Kennedy
Journal:  Science       Date:  2005-11-18       Impact factor: 47.728

6.  Genes determining yeast replicative life span in a long-lived genetic background.

Authors:  Matt Kaeberlein; Kathryn T Kirkland; Stanley Fields; Brian K Kennedy
Journal:  Mech Ageing Dev       Date:  2005-01-07       Impact factor: 5.432

7.  Elimination of replication block protein Fob1 extends the life span of yeast mother cells.

Authors:  P A Defossez; R Prusty; M Kaeberlein; S J Lin; P Ferrigno; P A Silver; R L Keil; L Guarente
Journal:  Mol Cell       Date:  1999-04       Impact factor: 17.970

8.  The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms.

Authors:  M Kaeberlein; M McVey; L Guarente
Journal:  Genes Dev       Date:  1999-10-01       Impact factor: 11.361

Review 9.  Identifying genes that extend life span using a high-throughput screening system.

Authors:  Cuiying Chen; Roland Contreras
Journal:  Methods Mol Biol       Date:  2007

Review 10.  Understanding the odd science of aging.

Authors:  Thomas B L Kirkwood
Journal:  Cell       Date:  2005-02-25       Impact factor: 41.582

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  91 in total

1.  Whole lifespan microscopic observation of budding yeast aging through a microfluidic dissection platform.

Authors:  Sung Sik Lee; Ima Avalos Vizcarra; Daphne H E W Huberts; Luke P Lee; Matthias Heinemann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-14       Impact factor: 11.205

2.  Cell biology: High-tech yeast ageing.

Authors:  Michael Polymenis; Brian K Kennedy
Journal:  Nature       Date:  2012-06-06       Impact factor: 49.962

3.  Elevated histone expression promotes life span extension.

Authors:  Jason Feser; David Truong; Chandrima Das; Joshua J Carson; Jeffrey Kieft; Troy Harkness; Jessica K Tyler
Journal:  Mol Cell       Date:  2010-09-10       Impact factor: 17.970

Review 4.  Lessons on longevity from budding yeast.

Authors:  Matt Kaeberlein
Journal:  Nature       Date:  2010-03-25       Impact factor: 49.962

5.  Recombination-induced tag exchange to track old and new proteins.

Authors:  Kitty F Verzijlbergen; Victoria Menendez-Benito; Tibor van Welsem; Sjoerd J van Deventer; Derek L Lindstrom; Huib Ovaa; Jacques Neefjes; Daniel E Gottschling; Fred van Leeuwen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-14       Impact factor: 11.205

6.  A High-Throughput Screen for Yeast Replicative Lifespan Identifies Lifespan-Extending Compounds.

Authors:  Ethan A Sarnoski; Ping Liu; Murat Acar
Journal:  Cell Rep       Date:  2017-11-28       Impact factor: 9.423

7.  Temporal profiling of redox-dependent heterogeneity in single cells.

Authors:  Meytal Radzinski; Rosi Fassler; Ohad Yogev; William Breuer; Nadav Shai; Jenia Gutin; Sidra Ilyas; Yifat Geffen; Sabina Tsytkin-Kirschenzweig; Yaakov Nahmias; Tommer Ravid; Nir Friedman; Maya Schuldiner; Dana Reichmann
Journal:  Elife       Date:  2018-06-05       Impact factor: 8.140

Review 8.  Recent Developments in Single-Cell RNA-Seq of Microorganisms.

Authors:  Yi Zhang; Jiaxin Gao; Yanyi Huang; Jianbin Wang
Journal:  Biophys J       Date:  2018-06-26       Impact factor: 4.033

9.  Ssd1 and Gcn2 suppress global translation efficiency in replicatively aged yeast while their activation extends lifespan.

Authors:  Zheng Hu; Bo Xia; Spike Dl Postnikoff; Zih-Jie Shen; Alin S Tomoiaga; Troy A Harkness; Ja Hwan Seol; Wei Li; Kaifu Chen; Jessica K Tyler
Journal:  Elife       Date:  2018-08-17       Impact factor: 8.140

10.  SCRaMbLE: A Study of Its Robustness and Challenges through Enhancement of Hygromycin B Resistance in a Semi-Synthetic Yeast.

Authors:  Jun Yang Ong; Reem Swidah; Marco Monti; Daniel Schindler; Junbiao Dai; Yizhi Cai
Journal:  Bioengineering (Basel)       Date:  2021-03-23
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