Literature DB >> 19648369

Microbial biogeography of six salt lakes in Inner Mongolia, China, and a salt lake in Argentina.

Eulyn Pagaling1, Huanzhi Wang, Madeleine Venables, Andrew Wallace, William D Grant, Don A Cowan, Brian E Jones, Yanhe Ma, Antonio Ventosa, Shaun Heaphy.   

Abstract

We used cultivation-independent methods to investigate the prokaryotic biogeography of the water column in six salt lakes in Inner Mongolia, China, and a salt lake in Argentina. These lakes had different salt compositions and pH values and were at variable geographic distances, on both local and intercontinental scales, which allowed us to explore the microbial community composition within the context of both contemporary environmental conditions and geographic distance. Fourteen 16S rRNA gene clone libraries were constructed, and over 200 16S rRNA gene sequences were obtained. These sequences were used to construct biotic similarity matrices, which were used in combination with environmental similarity matrices and a distance matrix in the Mantel test to discover which factors significantly influenced biotic similarity. We showed that archaeal biogeography was influenced by contemporary environmental factors alone (Na+, CO3(2-), and HCO3(-) ion concentrations; pH; and temperature). Bacterial biogeography was influenced both by contemporary environmental factors (Na+, Mg2+, and HCO3(-) ion concentrations and pH) and by geographic distance.

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Year:  2009        PMID: 19648369      PMCID: PMC2747855          DOI: 10.1128/AEM.00040-09

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  51 in total

1.  Global dispersal of free-living microbial eukaryote species.

Authors:  Bland J Finlay
Journal:  Science       Date:  2002-05-10       Impact factor: 47.728

2.  Novel archaeal phylotypes from an East African alkaline saltern.

Authors:  S Grant; W D Grant; B E Jones; C Kato; L Li
Journal:  Extremophiles       Date:  1999-05       Impact factor: 2.395

3.  Intracellular ion and organic solute concentrations of the extremely halophilic bacterium Salinibacter ruber.

Authors:  Aharon Oren; Mikal Heldal; Svein Norland; Erwin A Galinski
Journal:  Extremophiles       Date:  2002-08-24       Impact factor: 2.395

4.  Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern.

Authors:  Emilio O Casamayor; Ramon Massana; Susana Benlloch; Lise Øvreås; Beatriz Díez; Victoria J Goddard; Josep M Gasol; Ian Joint; Francisco Rodríguez-Valera; Carlos Pedrós-Alió
Journal:  Environ Microbiol       Date:  2002-06       Impact factor: 5.491

5.  Geographical isolation in hot spring cyanobacteria.

Authors:  R Thane Papke; Niels B Ramsing; Mary M Bateson; David M Ward
Journal:  Environ Microbiol       Date:  2003-08       Impact factor: 5.491

Review 6.  Salt-dependent properties of proteins from extremely halophilic bacteria.

Authors:  J K Lanyi
Journal:  Bacteriol Rev       Date:  1974-09

7.  Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern.

Authors:  Susana Benlloch; Arantxa López-López; Emilio O Casamayor; Lise Øvreås; Victoria Goddard; Frida Lise Daae; Gary Smerdon; Ramón Massana; Ian Joint; Frede Thingstad; Carlos Pedrós-Alió; Francisco Rodríguez-Valera
Journal:  Environ Microbiol       Date:  2002-06       Impact factor: 5.491

8.  Combined use of cultivation-dependent and cultivation-independent methods indicates that members of most haloarchaeal groups in an Australian crystallizer pond are cultivable.

Authors:  D G Burns; H M Camakaris; P H Janssen; M L Dyall-Smith
Journal:  Appl Environ Microbiol       Date:  2004-09       Impact factor: 4.792

9.  The high salt requirement of the moderate halophile Chromohalobacter salexigens DSM3043 can be met not only by NaCl but by other ions.

Authors:  Kathleen O'Connor; Laszlo N Csonka
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

10.  At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies.

Authors:  Kevin E Ashelford; Nadia A Chuzhanova; John C Fry; Antonia J Jones; Andrew J Weightman
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

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  38 in total

1.  Bacterial and archaeal diversity in two hot spring microbial mats from the geothermal region of Tengchong, China.

Authors:  Eulyn Pagaling; William D Grant; Don A Cowan; Brian E Jones; Yanhe Ma; Antonio Ventosa; Shaun Heaphy
Journal:  Extremophiles       Date:  2012-05-24       Impact factor: 2.395

2.  Halophiles 2010: life in saline environments.

Authors:  Yanhe Ma; Erwin A Galinski; William D Grant; Aharon Oren; Antonio Ventosa
Journal:  Appl Environ Microbiol       Date:  2010-09-03       Impact factor: 4.792

3.  Prokaryotic Community Diversity Along an Increasing Salt Gradient in a Soda Ash Concentration Pond.

Authors:  Addis Simachew; Anders Lanzén; Amare Gessesse; Lise Øvreås
Journal:  Microb Ecol       Date:  2015-09-26       Impact factor: 4.552

4.  Bacterial Diversity in the Soda Saline Crater Lake from Isabel Island, Mexico.

Authors:  José Félix Aguirre-Garrido; Hugo César Ramírez-Saad; Nicolás Toro; Francisco Martínez-Abarca
Journal:  Microb Ecol       Date:  2015-09-21       Impact factor: 4.552

5.  Seasonal fluctuations in ionic concentrations drive microbial succession in a hypersaline lake community.

Authors:  Sheila Podell; Joanne B Emerson; Claudia M Jones; Juan A Ugalde; Sue Welch; Karla B Heidelberg; Jillian F Banfield; Eric E Allen
Journal:  ISME J       Date:  2013-12-12       Impact factor: 10.302

6.  De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities.

Authors:  Priya Narasingarao; Sheila Podell; Juan A Ugalde; Céline Brochier-Armanet; Joanne B Emerson; Jochen J Brocks; Karla B Heidelberg; Jillian F Banfield; Eric E Allen
Journal:  ISME J       Date:  2011-06-30       Impact factor: 10.302

7.  Phylogenetic diversity of bacterial and archaeal communities inhabiting the saline Lake Red located in Sovata, Romania.

Authors:  Andrea K Borsodi; Tamás Felföldi; István Máthé; Vivien Bognár; Mónika Knáb; Gergely Krett; Laura Jurecska; Erika M Tóth; Károly Márialigeti
Journal:  Extremophiles       Date:  2012-11-07       Impact factor: 2.395

8.  The biogeography of fungal communities in wetland sediments along the Changjiang River and other sites in China.

Authors:  Bing Wu; Jianqing Tian; Chunming Bai; Meichun Xiang; Jingzu Sun; Xingzhong Liu
Journal:  ISME J       Date:  2013-02-28       Impact factor: 10.302

Review 9.  The Santa Pola saltern as a model for studying the microbiota of hypersaline environments.

Authors:  Antonio Ventosa; Ana Beatriz Fernández; María José León; Cristina Sánchez-Porro; Francisco Rodriguez-Valera
Journal:  Extremophiles       Date:  2014-08-17       Impact factor: 2.395

10.  Desert Perennial Shrubs Shape the Microbial-Community Miscellany in Laimosphere and Phyllosphere Space.

Authors:  Varsik Martirosyan; Adrian Unc; Gad Miller; Tirza Doniger; Chaim Wachtel; Yosef Steinberger
Journal:  Microb Ecol       Date:  2016-07-23       Impact factor: 4.552

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