Literature DB >> 19643982

Correction for interference by test samples in high-throughput assays.

Adam B Shapiro1, Grant K Walkup, Thomas A Keating.   

Abstract

In high-throughput biochemical assays performed in multiwell plates, the effect of test samples on the activity of the biochemical system is usually measured by optical means such as absorbance, fluorescence, luminescence, or scintillation counting. The test sample often causes detection interference when it remains in the well during the measurement. Interference may be due to light absorption, fluorescence quenching, sample fluorescence, chemical interaction of the sample with a detection reagent, or depression of the meniscus. A simple method is described that corrects for such interference well by well. The interference is measured in a separate artifact assay plate. An appropriate arithmetic correction is then applied to the measurement in the corresponding well of the activity assay plate. The correction procedure can be used for single-point screening or potency measurements on serial dilutions of test samples.

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Year:  2009        PMID: 19643982     DOI: 10.1177/1087057109341768

Source DB:  PubMed          Journal:  J Biomol Screen        ISSN: 1087-0571


  14 in total

1.  Assessing HTS performance using BioAssay Ontology: screening and analysis of a bacterial phospho-N-acetylmuramoyl-pentapeptide translocase campaign.

Authors:  Andreas Moberg; Linda Zander Balderud; Eva Hansson; Helen Boyd
Journal:  Assay Drug Dev Technol       Date:  2014 Nov-Dec       Impact factor: 1.738

2.  A novel high-throughput cell-based assay aimed at identifying inhibitors of DNA metabolism in bacteria.

Authors:  Jun Fan; Boudewijn L M de Jonge; Kathy MacCormack; Shubha Sriram; Robert E McLaughlin; Helen Plant; Marian Preston; Paul R Fleming; Robert Albert; Melinda Foulk; Scott D Mills
Journal:  Antimicrob Agents Chemother       Date:  2014-09-22       Impact factor: 5.191

3.  A continuous, fluorescent, high-throughput assay for human dimethylarginine dimethylaminohydrolase-1.

Authors:  Thomas Linsky; Walter Fast
Journal:  J Biomol Screen       Date:  2011-09-15

4.  Novel antibacterial targets and compounds revealed by a high-throughput cell wall reporter assay.

Authors:  Asha S Nayar; Thomas J Dougherty; Keith E Ferguson; Brett A Granger; Lisa McWilliams; Clare Stacey; Lindsey J Leach; Shin-Ichiro Narita; Hajime Tokuda; Alita A Miller; Dean G Brown; Sarah M McLeod
Journal:  J Bacteriol       Date:  2015-03-02       Impact factor: 3.490

Review 5.  Apparent activity in high-throughput screening: origins of compound-dependent assay interference.

Authors:  Natasha Thorne; Douglas S Auld; James Inglese
Journal:  Curr Opin Chem Biol       Date:  2010-04-22       Impact factor: 8.822

6.  Novel rapidly diversifiable antimicrobial RNA polymerase switch region inhibitors with confirmed mode of action in Haemophilus influenzae.

Authors:  Ed T Buurman; Melinda A Foulk; Ning Gao; Valerie A Laganas; David C McKinney; Demetri T Moustakas; Jonathan A Rose; Adam B Shapiro; Paul R Fleming
Journal:  J Bacteriol       Date:  2012-07-27       Impact factor: 3.490

7.  Screening for inhibitors of the hepatitis C virus internal ribosome entry site RNA.

Authors:  Shou Zhou; Kevin D Rynearson; Kejia Ding; Nicholas D Brunn; Thomas Hermann
Journal:  Bioorg Med Chem       Date:  2013-04-02       Impact factor: 3.641

Review 8.  The essential roles of chemistry in high-throughput screening triage.

Authors:  Jayme L Dahlin; Michael A Walters
Journal:  Future Med Chem       Date:  2014-07       Impact factor: 3.808

9.  Bacterial Cytological Profiling Identifies Rhodanine-Containing PAINS Analogs as Specific Inhibitors of Escherichia coli Thymidylate Kinase In Vivo.

Authors:  Elizabeth T Montaño; Jason F Nideffer; Joseph Sugie; Eray Enustun; Adam B Shapiro; Hannah Tsunemoto; Alan I Derman; Kit Pogliano; Joe Pogliano
Journal:  J Bacteriol       Date:  2021-09-08       Impact factor: 3.490

10.  Real-time detection of DNA topological changes with a fluorescently labeled cruciform.

Authors:  Kevin M Jude; Abbey Hartland; James M Berger
Journal:  Nucleic Acids Res       Date:  2013-05-16       Impact factor: 16.971

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