Literature DB >> 19636888

NMR assignment of the nonstructural protein nsp3(1066-1181) from SARS-CoV.

Pedro Serrano1, Margaret A Johnson, Amarnath Chatterjee, Bill Pedrini, Kurt Wüthrich.   

Abstract

Sequence-specific NMR assignments of the globular core comprising the residues 1066-1181 within the non-structural protein nsp3e from the SARS coronavirus have been obtained using triple-resonance NMR experiments with the uniformly [(13)C, (15)N]-labeled protein. The backbone and side chain assignments are nearly complete, providing the basis for the ongoing NMR structure determination. A preliminary identification of regular secondary structures has been derived from the (13)C chemical shifts.

Entities:  

Mesh：

Substances：

Year:  2008        PMID： 19636888      PMCID： PMC2776825          DOI： 10.1007/s12104-008-9104-x

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN： 1874-270X            Impact factor:   0.746


  9 in total

1.  Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

2.  Protein NMR structure determination with automated NOE-identification in the NOESY spectra using the new software ATNOS.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Biomol NMR       Date:  2002-11       Impact factor: 2.835

3.  Severe acute respiratory syndrome coronavirus papain-like protease: structure of a viral deubiquitinating enzyme.

Authors:  Kiira Ratia; Kumar Singh Saikatendu; Bernard D Santarsiero; Naina Barretto; Susan C Baker; Raymond C Stevens; Andrew D Mesecar
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-31       Impact factor: 11.205

4.  Nuclear magnetic resonance structure of the N-terminal domain of nonstructural protein 3 from the severe acute respiratory syndrome coronavirus.

Authors:  Pedro Serrano; Margaret A Johnson; Marcius S Almeida; Reto Horst; Torsten Herrmann; Jeremiah S Joseph; Benjamin W Neuman; Vanitha Subramanian; Kumar S Saikatendu; Michael J Buchmeier; Raymond C Stevens; Peter Kuhn; Kurt Wüthrich
Journal:  J Virol       Date:  2007-08-29       Impact factor: 5.103

5.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

6.  The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data.

Authors:  D S Wishart; B D Sykes
Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835

7.  Characterization of the three-dimensional solution structure of human profilin: 1H, 13C, and 15N NMR assignments and global folding pattern.

Authors:  W J Metzler; K L Constantine; M S Friedrichs; A J Bell; E G Ernst; T B Lavoie; L Mueller
Journal:  Biochemistry       Date:  1993-12-21       Impact factor: 3.162

8.  Structural basis of severe acute respiratory syndrome coronavirus ADP-ribose-1''-phosphate dephosphorylation by a conserved domain of nsP3.

Authors:  Kumar Singh Saikatendu; Jeremiah S Joseph; Vanitha Subramanian; Tom Clayton; Mark Griffith; Kin Moy; Jeffrey Velasquez; Benjamin W Neuman; Michael J Buchmeier; Raymond C Stevens; Peter Kuhn
Journal:  Structure       Date:  2005-11       Impact factor: 5.006

9.  Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage.

Authors:  Eric J Snijder; Peter J Bredenbeek; Jessika C Dobbe; Volker Thiel; John Ziebuhr; Leo L M Poon; Yi Guan; Mikhail Rozanov; Willy J M Spaan; Alexander E Gorbalenya
Journal:  J Mol Biol       Date:  2003-08-29       Impact factor: 5.469
  9 in total
  3 in total

1.  Nuclear magnetic resonance structure of the nucleic acid-binding domain of severe acute respiratory syndrome coronavirus nonstructural protein 3.

Authors:  Pedro Serrano; Margaret A Johnson; Amarnath Chatterjee; Benjamin W Neuman; Jeremiah S Joseph; Michael J Buchmeier; Peter Kuhn; Kurt Wüthrich
Journal:  J Virol       Date:  2009-10-14       Impact factor: 5.103

2.  Modeling of the Toll-like receptor 3 and a putative Toll-like receptor 3 antagonist encoded by the African swine fever virus.

Authors:  Elsa S Henriques; Rui M M Brito; Hugo Soares; Sónia Ventura; Vivian L de Oliveira; R Michael E Parkhouse
Journal:  Protein Sci       Date:  2011-02       Impact factor: 6.725

3.  1H, 13C, and 15N backbone chemical shift assignments of the nucleic acid-binding domain of SARS-CoV-2 non-structural protein 3e.

Authors:  Sophie M Korn; Karthikeyan Dhamotharan; Boris Fürtig; Martin Hengesbach; Frank Löhr; Nusrat S Qureshi; Christian Richter; Krishna Saxena; Harald Schwalbe; Jan-Niklas Tants; Julia E Weigand; Jens Wöhnert; Andreas Schlundt
Journal:  Biomol NMR Assign       Date:  2020-08-08       Impact factor: 0.746
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.