Literature DB >> 19636862

NMR assignment of the domain 513-651 from the SARS-CoV nonstructural protein nsp3.

Amarnath Chatterjee1, Margaret A Johnson, Pedro Serrano, Bill Pedrini, Kurt Wüthrich.   

Abstract

Sequence-specific NMR assignments of an internal domain of the protein nsp3, nsp3(513-651), which is a part of the SARS coronavirus (SARS-CoV) replicase polyprotein, have been determined, using triple-resonance NMR experiments with the uniformly [(13)C,(15)N]-labeled protein. The complete assignments (>99%) provide the basis for the ongoing three-dimensional structure determination.

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Year:  2007        PMID： 19636862      PMCID： PMC7090708          DOI： 10.1007/s12104-007-9052-x

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN： 1874-270X            Impact factor:   0.746


  12 in total

1.  Protein NMR structure determination with automated NOE-identification in the NOESY spectra using the new software ATNOS.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
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Review 2.  An overall picture of SARS coronavirus (SARS-CoV) genome-encoded major proteins: structures, functions and drug development.

Authors:  Shuai Chen; Haibin Luo; Lili Chen; Jing Chen; Jianhua Shen; Weiliang Zhu; Kaixian Chen; Xu Shen; Hualiang Jiang
Journal:  Curr Pharm Des       Date:  2006       Impact factor: 3.116

3.  Identification and characterization of severe acute respiratory syndrome coronavirus replicase proteins.

Authors:  Erik Prentice; Josephine McAuliffe; Xiaotao Lu; Kanta Subbarao; Mark R Denison
Journal:  J Virol       Date:  2004-09       Impact factor: 5.103

4.  Mechanisms and enzymes involved in SARS coronavirus genome expression.

Authors:  Volker Thiel; Konstantin A Ivanov; Ákos Putics; Tobias Hertzig; Barbara Schelle; Sonja Bayer; Benedikt Weißbrich; Eric J Snijder; Holger Rabenau; Hans Wilhelm Doerr; Alexander E Gorbalenya; John Ziebuhr
Journal:  J Gen Virol       Date:  2003-09       Impact factor: 3.891

5.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

6.  The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data.

Authors:  D S Wishart; B D Sykes
Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835

7.  Characterization of the three-dimensional solution structure of human profilin: 1H, 13C, and 15N NMR assignments and global folding pattern.

Authors:  W J Metzler; K L Constantine; M S Friedrichs; A J Bell; E G Ernst; T B Lavoie; L Mueller
Journal:  Biochemistry       Date:  1993-12-21       Impact factor: 3.162

8.  Processing of the coronavirus MHV-JHM polymerase polyprotein: identification of precursors and proteolytic products spanning 400 kilodaltons of ORF1a.

Authors:  J J Schiller; A Kanjanahaluethai; S C Baker
Journal:  Virology       Date:  1998-03-15       Impact factor: 3.616

Review 9.  Structural insights into SARS coronavirus proteins.

Authors:  Mark Bartlam; Haitao Yang; Zihe Rao
Journal:  Curr Opin Struct Biol       Date:  2005-11-02       Impact factor: 6.809

10.  Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage.

Authors:  Eric J Snijder; Peter J Bredenbeek; Jessika C Dobbe; Volker Thiel; John Ziebuhr; Leo L M Poon; Yi Guan; Mikhail Rozanov; Willy J M Spaan; Alexander E Gorbalenya
Journal:  J Mol Biol       Date:  2003-08-29       Impact factor: 5.469
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  3 in total

1.  Nuclear magnetic resonance structure shows that the severe acute respiratory syndrome coronavirus-unique domain contains a macrodomain fold.

Authors:  Amarnath Chatterjee; Margaret A Johnson; Pedro Serrano; Bill Pedrini; Jeremiah S Joseph; Benjamin W Neuman; Kumar Saikatendu; Michael J Buchmeier; Peter Kuhn; Kurt Wüthrich
Journal:  J Virol       Date:  2008-12-03       Impact factor: 5.103

2.  Proteomics analysis unravels the functional repertoire of coronavirus nonstructural protein 3.

Authors:  Benjamin W Neuman; Jeremiah S Joseph; Kumar S Saikatendu; Pedro Serrano; Amarnath Chatterjee; Margaret A Johnson; Lujian Liao; Joseph P Klaus; John R Yates; Kurt Wüthrich; Raymond C Stevens; Michael J Buchmeier; Peter Kuhn
Journal:  J Virol       Date:  2008-03-26       Impact factor: 5.103

3.  The SARS-unique domain (SUD) of SARS coronavirus contains two macrodomains that bind G-quadruplexes.

Authors:  Jinzhi Tan; Clemens Vonrhein; Oliver S Smart; Gerard Bricogne; Michela Bollati; Yuri Kusov; Guido Hansen; Jeroen R Mesters; Christian L Schmidt; Rolf Hilgenfeld
Journal:  PLoS Pathog       Date:  2009-05-15       Impact factor: 6.823
  3 in total

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