Literature DB >> 19633266

Functional dissection of the catalytic carboxyl-terminal domain of origin recognition complex subunit 1 (PfORC1) of the human malaria parasite Plasmodium falciparum.

Ashish Gupta1, Parul Mehra, Abhijeet Deshmukh, Ashraf Dar, Pallabi Mitra, Nilanjan Roy, Suman Kumar Dhar.   

Abstract

Origin recognition complex subunit 1 (ORC1) is essential for DNA replication in eukaryotes. The deadly human malaria parasite Plasmodium falciparum contains an ORC1/CDC6 homolog with several interesting domains at the catalytic carboxyl-terminal region that include a putative nucleoside triphosphate-binding and hydrolysis domain, a putative PCNA-interacting-protein (PIP) motif, and an extreme C-terminal region that shows poor homology with other ORC1 homologs. Due to the unavailability of a dependable inducible gene expression system, it is difficult to study the structure and function of essential genes in Plasmodium. Using a genetic yeast complementation system and biochemical experiments, here we show that the putative PIP domain in ORC1 that facilitates in vitro physical interaction with PCNA is functional in both yeast (Saccharomyces cerevisiae) and Plasmodium in vivo, confirming its essential biological role in eukaryotes. Furthermore, despite having less sequence homology, the extreme C-terminal region can be swapped between S. cerevisiae and P. falciparum and it binds to DNA directly, suggesting a conserved role of this region in DNA replication. These results not only provide us a useful system to study the function of the essential genes in Plasmodium, they help us to identify the previously undiscovered unique features of replication proteins in general.

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Year:  2009        PMID: 19633266      PMCID: PMC2747822          DOI: 10.1128/EC.00170-09

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  29 in total

1.  Structure and function of Cdc6/Cdc18: implications for origin recognition and checkpoint control.

Authors:  J Liu; C L Smith; D DeRyckere; K DeAngelis; G S Martin; J M Berger
Journal:  Mol Cell       Date:  2000-09       Impact factor: 17.970

2.  Characterisation of a sexual stage-specific gene encoding ORC1 homologue in the human malaria parasite Plasmodium falciparum.

Authors:  Ji-Liang Li; Lynne S Cox
Journal:  Parasitol Int       Date:  2003-03       Impact factor: 2.230

3.  Structural basis of DNA replication origin recognition by an ORC protein.

Authors:  Martin Gaudier; Barbara S Schuwirth; Sarah L Westcott; Dale B Wigley
Journal:  Science       Date:  2007-08-31       Impact factor: 47.728

4.  Separate SCF(CDC4) recognition elements target Cdc6 for proteolysis in S phase and mitosis.

Authors:  G Perkins; L S Drury; J F Diffley
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

5.  Replication origin recognition and deformation by a heterodimeric archaeal Orc1 complex.

Authors:  Erin L Cunningham Dueber; Jacob E Corn; Stephen D Bell; James M Berger
Journal:  Science       Date:  2007-08-31       Impact factor: 47.728

6.  Identification and initial characterization of three novel cyclin-related proteins of the human malaria parasite Plasmodium falciparum.

Authors:  Anaïs Merckx; Karine Le Roch; Marie-Paule Nivez; Dominique Dorin; Pietro Alano; Gustavo J Gutierrez; Angel R Nebreda; Dean Goldring; Christina Whittle; Shelley Patterson; Debopam Chakrabarti; Christian Doerig
Journal:  J Biol Chem       Date:  2003-07-17       Impact factor: 5.157

7.  Expression and subcellular localization of ORC1 in Leishmania major.

Authors:  Diwakar Kumar; Agnideep Mukherji; Swati Saha
Journal:  Biochem Biophys Res Commun       Date:  2008-08-03       Impact factor: 3.575

8.  Differential association of Orc1 and Sir2 proteins to telomeric domains in Plasmodium falciparum.

Authors:  Liliana Mancio-Silva; Ana Paola Rojas-Meza; Miguel Vargas; Artur Scherf; Rosaura Hernandez-Rivas
Journal:  J Cell Sci       Date:  2008-06-15       Impact factor: 5.285

9.  The architecture of the DNA replication origin recognition complex in Saccharomyces cerevisiae.

Authors:  Zhiqiang Chen; Christian Speck; Patricia Wendel; Chunyan Tang; Bruce Stillman; Huilin Li
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-22       Impact factor: 11.205

10.  Plasmodium falciparum origin recognition complex subunit 5: functional characterization and role in DNA replication foci formation.

Authors:  Ashish Gupta; Parul Mehra; Suman Kumar Dhar
Journal:  Mol Microbiol       Date:  2008-06-28       Impact factor: 3.501

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  6 in total

Review 1.  Regulation of DNA replication proteins in parasitic protozoans: possible role of CDK-like kinases.

Authors:  Abhijit S Deshmukh; Meetu Agarwal; Suman Kumar Dhar
Journal:  Curr Genet       Date:  2016-01-16       Impact factor: 3.886

Review 2.  Telomeric heterochromatin in Plasmodium falciparum.

Authors:  Rosaura Hernandez-Rivas; Karla Pérez-Toledo; Abril-Marcela Herrera Solorio; Dulce María Delgadillo; Miguel Vargas
Journal:  J Biomed Biotechnol       Date:  2010-02-11

3.  Characterization of Leishmania donovani MCM4: expression patterns and interaction with PCNA.

Authors:  Neha Minocha; Devanand Kumar; Kalpana Rajanala; Swati Saha
Journal:  PLoS One       Date:  2011-07-29       Impact factor: 3.240

4.  Identification of ORC1/CDC6-interacting factors in Trypanosoma brucei reveals critical features of origin recognition complex architecture.

Authors:  Calvin Tiengwe; Lucio Marcello; Helen Farr; Catarina Gadelha; Richard Burchmore; J David Barry; Stephen D Bell; Richard McCulloch
Journal:  PLoS One       Date:  2012-03-08       Impact factor: 3.240

5.  The role of N-terminus of Plasmodium falciparum ORC1 in telomeric localization and var gene silencing.

Authors:  Abhijit S Deshmukh; Sandeep Srivastava; Susann Herrmann; Ashish Gupta; Pallabi Mitra; Tim Wolf Gilberger; Suman Kumar Dhar
Journal:  Nucleic Acids Res       Date:  2012-02-29       Impact factor: 16.971

6.  Evidence for the Nucleo-Apical Shuttling of a Beta-Catenin Like Plasmodium falciparum Armadillo Repeat Containing Protein.

Authors:  Pallabi Mitra; Enna Dogra Gupta; Tajali Sahar; Alok K Pandey; Poonam Dangi; K Sony Reddy; Virander Singh Chauhan; Deepak Gaur
Journal:  PLoS One       Date:  2016-02-01       Impact factor: 3.240

  6 in total

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