Literature DB >> 19632885

Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms.

Michiel Schaap1, Coert T Metz, Theo van Walsum, Alina G van der Giessen, Annick C Weustink, Nico R Mollet, Christian Bauer, Hrvoje Bogunović, Carlos Castro, Xiang Deng, Engin Dikici, Thomas O'Donnell, Michel Frenay, Ola Friman, Marcela Hernández Hoyos, Pieter H Kitslaar, Karl Krissian, Caroline Kühnel, Miguel A Luengo-Oroz, Maciej Orkisz, Orjan Smedby, Martin Styner, Andrzej Szymczak, Hüseyin Tek, Chunliang Wang, Simon K Warfield, Sebastian Zambal, Yong Zhang, Gabriel P Krestin, Wiro J Niessen.   

Abstract

Efficiently obtaining a reliable coronary artery centerline from computed tomography angiography data is relevant in clinical practice. Whereas numerous methods have been presented for this purpose, up to now no standardized evaluation methodology has been published to reliably evaluate and compare the performance of the existing or newly developed coronary artery centerline extraction algorithms. This paper describes a standardized evaluation methodology and reference database for the quantitative evaluation of coronary artery centerline extraction algorithms. The contribution of this work is fourfold: (1) a method is described to create a consensus centerline with multiple observers, (2) well-defined measures are presented for the evaluation of coronary artery centerline extraction algorithms, (3) a database containing 32 cardiac CTA datasets with corresponding reference standard is described and made available, and (4) 13 coronary artery centerline extraction algorithms, implemented by different research groups, are quantitatively evaluated and compared. The presented evaluation framework is made available to the medical imaging community for benchmarking existing or newly developed coronary centerline extraction algorithms.

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Year:  2009        PMID: 19632885      PMCID: PMC3843509          DOI: 10.1016/j.media.2009.06.003

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  33 in total

1.  Ridge-based vessel segmentation in color images of the retina.

Authors:  Joes Staal; Michael D Abràmoff; Meindert Niemeijer; Max A Viergever; Bram van Ginneken
Journal:  IEEE Trans Med Imaging       Date:  2004-04       Impact factor: 10.048

2.  Multislice CT coronary angiography: evaluation of an automatic vessel detection tool.

Authors:  M Dewey; D Schnapauff; M Laule; A Lembcke; A C Borges; W Rutsch; B Hamm; P Rogalla
Journal:  Rofo       Date:  2004-04

3.  A comprehensive shape model of the heart.

Authors:  Cristian Lorenz; Jens von Berg
Journal:  Med Image Anal       Date:  2006-05-18       Impact factor: 8.545

4.  Coronary artery segmentation and skeletonization based on competing fuzzy connectedness tree.

Authors:  Chunliang Wang; Orjan Smedby
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

5.  Facilitating coronary artery evaluation in MDCT using a 3D automatic vessel segmentation tool.

Authors:  M Fawad Khan; Stefan Wesarg; Jessen Gurung; Selami Dogan; Adel Maataoui; Boris Brehmer; Christopher Herzog; Hanns Ackermann; Birgit Assmus; Thomas J Vogl
Journal:  Eur Radiol       Date:  2006-03-10       Impact factor: 5.315

Review 6.  Applications of multislice coronary computed tomographic angiography to percutaneous coronary intervention: how did we ever do without it?

Authors:  Harvey S Hecht
Journal:  Catheter Cardiovasc Interv       Date:  2008-03-01       Impact factor: 2.692

7.  Snakes, shapes, and gradient vector flow.

Authors:  C Xu; J L Prince
Journal:  IEEE Trans Image Process       Date:  1998       Impact factor: 10.856

8.  Visual and automatic grading of coronary artery stenoses with 64-slice CT angiography in reference to invasive angiography.

Authors:  Stephanie Busch; Thorsten R C Johnson; Konstantin Nikolaou; Franz von Ziegler; Andreas Knez; Maximilian F Reiser; Christoph R Becker
Journal:  Eur Radiol       Date:  2006-12-16       Impact factor: 5.315

9.  Cataloguing the geometry of the human coronary arteries: a potential tool for predicting risk of coronary artery disease.

Authors:  Hui Zhu; Zhaohua Ding; Robert N Piana; Thomas R Gehrig; Morton H Friedman
Journal:  Int J Cardiol       Date:  2008-07-01       Impact factor: 4.164

Review 10.  Systematic review of the clinical effectiveness and cost-effectiveness of 64-slice or higher computed tomography angiography as an alternative to invasive coronary angiography in the investigation of coronary artery disease.

Authors:  G Mowatt; E Cummins; N Waugh; S Walker; J Cook; X Jia; G S Hillis; C Fraser
Journal:  Health Technol Assess       Date:  2008-05       Impact factor: 4.014

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  48 in total

1.  Automatic centerline extraction of coronary arteries in coronary computed tomographic angiography.

Authors:  Guanyu Yang; Pieter Kitslaar; Michel Frenay; Alexander Broersen; Mark J Boogers; Jeroen J Bax; Johan H C Reiber; Jouke Dijkstra
Journal:  Int J Cardiovasc Imaging       Date:  2011-06-03       Impact factor: 2.357

2.  The DIADEM metric: comparing multiple reconstructions of the same neuron.

Authors:  Todd A Gillette; Kerry M Brown; Giorgio A Ascoli
Journal:  Neuroinformatics       Date:  2011-09

3.  On limitations of studies and limitations of therapy options for carotid stenosis: why play golf with only a sand wedge?

Authors:  Jens Fiehler
Journal:  Neuroradiology       Date:  2010-05-14       Impact factor: 2.804

4.  Automatic detection of abnormal vascular cross-sections based on density level detection and support vector machines.

Authors:  Maria A Zuluaga; Isabelle E Magnin; Marcela Hernández Hoyos; Edgar J F Delgado Leyton; Fernando Lozano; Maciej Orkisz
Journal:  Int J Comput Assist Radiol Surg       Date:  2010-06-13       Impact factor: 2.924

5.  A qualitative and quantitative study of coronary artery MRA.

Authors:  Jérôme Velut; Pierre-Axel Lentz; Clément Philipot; Marie-Paule Garcia; Christine Toumoulin
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

6.  Longitudinal multiple sclerosis lesion segmentation: Resource and challenge.

Authors:  Aaron Carass; Snehashis Roy; Amod Jog; Jennifer L Cuzzocreo; Elizabeth Magrath; Adrian Gherman; Julia Button; James Nguyen; Ferran Prados; Carole H Sudre; Manuel Jorge Cardoso; Niamh Cawley; Olga Ciccarelli; Claudia A M Wheeler-Kingshott; Sébastien Ourselin; Laurence Catanese; Hrishikesh Deshpande; Pierre Maurel; Olivier Commowick; Christian Barillot; Xavier Tomas-Fernandez; Simon K Warfield; Suthirth Vaidya; Abhijith Chunduru; Ramanathan Muthuganapathy; Ganapathy Krishnamurthi; Andrew Jesson; Tal Arbel; Oskar Maier; Heinz Handels; Leonardo O Iheme; Devrim Unay; Saurabh Jain; Diana M Sima; Dirk Smeets; Mohsen Ghafoorian; Bram Platel; Ariel Birenbaum; Hayit Greenspan; Pierre-Louis Bazin; Peter A Calabresi; Ciprian M Crainiceanu; Lotta M Ellingsen; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Neuroimage       Date:  2017-01-11       Impact factor: 6.556

7.  Coronary artery segmentation using geometric moments based tracking and snake-driven refinement.

Authors:  Kun Chen; Yong Zhang; Kilian Pohl; Tanveer Syeda-Mahmood; Zhihuan Song; Stephen T C Wong
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

8.  Fully automatic model-based calcium segmentation and scoring in coronary CT angiography.

Authors:  Dov Eilot; Roman Goldenberg
Journal:  Int J Comput Assist Radiol Surg       Date:  2013-11-08       Impact factor: 2.924

9.  VESSEL CENTERLINE TRACKING AND BOUNDARY SEGMENTATION IN CORONARY MRA WITH MINIMAL MANUAL INTERACTION.

Authors:  Sahar Soleimanifard; Michael Schär; Allison G Hays; Robert G Weiss; Matthias Stuber; Jerry L Prince
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2012

10.  A collaborative resource to build consensus for automated left ventricular segmentation of cardiac MR images.

Authors:  Avan Suinesiaputra; Brett R Cowan; Ahmed O Al-Agamy; Mustafa A Elattar; Nicholas Ayache; Ahmed S Fahmy; Ayman M Khalifa; Pau Medrano-Gracia; Marie-Pierre Jolly; Alan H Kadish; Daniel C Lee; Ján Margeta; Simon K Warfield; Alistair A Young
Journal:  Med Image Anal       Date:  2013-09-13       Impact factor: 8.545

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