Literature DB >> 19628453

Pulmonary lobe segmentation in CT examinations using implicit surface fitting.

Jiantao Pu1, Bin Zheng, Joseph K Leader, Carl Fuhrman, Friedrich Knollmann, Amy Klym, David Gur.   

Abstract

Lobe identification in computed tomography (CT) examinations is often an important consideration during the diagnostic process as well as during treatment planning because of their relative independence of each other in terms of anatomy and function. In this paper, we present a new automated scheme for segmenting lung lobes depicted on 3-D CT examinations. The unique characteristic of this scheme is the representation of fissures in the form of implicit functions using Radial Basis Functions (RBFs), capable of seamlessly interpolating "holes" in the detected fissures and smoothly extrapolating the fissure surfaces to the lung boundaries resulting in a "natural" segmentation of lung lobes. A previously developed statistically based approach is used to detect pulmonary fissures and the constraint points for implicit surface fitting are selected from detected fissure surfaces in a greedy manner to improve fitting efficiency. In a preliminary assessment study, lobe segmentation results of 65 chest CT examinations, five of which were reconstructed with three section thicknesses of 0.625 mm, 1.25 mm, and 2.5 mm, were subjectively and independently evaluated by two experienced chest radiologists using a five category rating scale (i.e., excellent, good, fair, poor, and unacceptable). Thirty-three of 65 examinations (50.8%) with a section thickness of 0.625 mm were rated as either "excellent" or "good" by both radiologists and only one case (1.5%) was rated by both radiologists as "poor" or "unacceptable." Comparable performance was obtained with a slice thickness of 1.25 mm, but substantial performance deterioration occurred in examinations with a section thickness of 2.5 mm. The advantages of this scheme are its full automation, relative insensitivity to fissure completeness, and ease of implementation.

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Year:  2009        PMID: 19628453      PMCID: PMC2839920          DOI: 10.1109/TMI.2009.2027117

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  19 in total

Review 1.  Radiographic and CT appearances of the major fissures.

Authors:  K Hayashi; A Aziz; K Ashizawa; H Hayashi; K Nagaoki; H Otsuji
Journal:  Radiographics       Date:  2001 Jul-Aug       Impact factor: 5.333

2.  Anatomy of the minor fissure: assessment with high-resolution CT and classification.

Authors:  O Macit Ariyürek; Nevzat Karabulut; N Selçuk Yelgeç; Meltem Gülsün
Journal:  Eur Radiol       Date:  2001-05-31       Impact factor: 5.315

3.  Computer-aided diagnostic scheme for lung nodule detection in digital chest radiographs by use of a multiple-template matching technique.

Authors:  Q Li; S Katsuragawa; K Doi
Journal:  Med Phys       Date:  2001-10       Impact factor: 4.071

4.  High resolution CT anatomy of the pulmonary fissures.

Authors:  Aamer Aziz; Kazuto Ashizawa; Kenji Nagaoki; Kuniaki Hayashi
Journal:  J Thorac Imaging       Date:  2004-07       Impact factor: 3.000

5.  Segmentation of intrathoracic airway trees: a fuzzy logic approach.

Authors:  W Park; E A Hoffman; M Sonka
Journal:  IEEE Trans Med Imaging       Date:  1998-08       Impact factor: 10.048

6.  Accessory fissures of the upper lobe of the left lung: CT and plain film appearance.

Authors:  T Berkmen; Y M Berkmen; J H Austin
Journal:  AJR Am J Roentgenol       Date:  1994-06       Impact factor: 3.959

7.  A methodology for evaluation of boundary detection algorithms on medical images.

Authors:  V Chalana; Y Kim
Journal:  IEEE Trans Med Imaging       Date:  1997-10       Impact factor: 10.048

8.  Patient-specific models for lung nodule detection and surveillance in CT images.

Authors:  M S Brown; M F McNitt-Gray; J G Goldin; R D Suh; J W Sayre; D R Aberle
Journal:  IEEE Trans Med Imaging       Date:  2001-12       Impact factor: 10.048

9.  A Computational geometry approach to automated pulmonary fissure segmentation in CT examinations.

Authors:  Jiantao Pu; Joseph K Leader; Bin Zheng; Friedrich Knollmann; Carl Fuhrman; Frank C Sciurba; David Gur
Journal:  IEEE Trans Med Imaging       Date:  2008-12-09       Impact factor: 10.048

10.  Technique to reduce air leaks after pulmonary lobectomy.

Authors:  F Venuta; E A Rendina; T De Giacomo; I Flaishman; E Guarino; A M Ciccone; C Ricci
Journal:  Eur J Cardiothorac Surg       Date:  1998-04       Impact factor: 4.191

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  26 in total

1.  Computerized assessment of pulmonary fissure integrity using high resolution CT.

Authors:  Jiantao Pu; Carl Fuhrman; Janet Durick; Joseph K Leader; Amy Klym; Frank C Sciurba; David Gur
Journal:  Med Phys       Date:  2010-09       Impact factor: 4.071

2.  Illustration of the obstacles in computerized lung segmentation using examples.

Authors:  Xin Meng; Yongqian Qiang; Shaocheng Zhu; Carl Fuhrman; Jill M Siegfried; Jiantao Pu
Journal:  Med Phys       Date:  2012-08       Impact factor: 4.071

3.  Imaging Features of Chronic Bronchitis with Preserved Ratio and Impaired Spirometry (PRISm).

Authors:  Xia Wei; Qi Ding; Nan Yu; Jiuyun Mi; Jingting Ren; Jie Li; Shudi Xu; Yanzhong Gao; Youmin Guo
Journal:  Lung       Date:  2018-09-14       Impact factor: 2.584

4.  Pulmonary lobar volumetry using novel volumetric computer-aided diagnosis and computed tomography.

Authors:  Shingo Iwano; Mariko Kitano; Keiji Matsuo; Kenichi Kawakami; Wataru Koike; Mariko Kishimoto; Tsutomu Inoue; Yuanzhong Li; Shinji Naganawa
Journal:  Interact Cardiovasc Thorac Surg       Date:  2013-03-22

5.  Fully Automated Lung Lobe Segmentation in Volumetric Chest CT with 3D U-Net: Validation with Intra- and Extra-Datasets.

Authors:  Jongha Park; Jihye Yun; Namkug Kim; Beomhee Park; Yongwon Cho; Hee Jun Park; Mijeong Song; Minho Lee; Joon Beom Seo
Journal:  J Digit Imaging       Date:  2020-02       Impact factor: 4.056

6.  Pulmonary lobe separation in expiration chest CT scans based on subject-specific priors derived from inspiration scans.

Authors:  Christian Bauer; Michael Eberlein; Reinhard R Beichel
Journal:  J Med Imaging (Bellingham)       Date:  2018-02-09

7.  Separation of left and right lungs using 3-dimensional information of sequential computed tomography images and a guided dynamic programming algorithm.

Authors:  Sang Cheol Park; Joseph Ken Leader; Jun Tan; Guee Sang Lee; Soo Hyung Kim; In Seop Na; Bin Zheng
Journal:  J Comput Assist Tomogr       Date:  2011 Mar-Apr       Impact factor: 1.826

8.  Pulmonary lobe segmentation based on ridge surface sampling and shape model fitting.

Authors:  James C Ross; Gordon L Kindlmann; Yuka Okajima; Hiroto Hatabu; Alejandro A Díaz; Edwin K Silverman; George R Washko; Jennifer Dy; Raúl San José Estépar
Journal:  Med Phys       Date:  2013-12       Impact factor: 4.071

9.  Pulmonary Lobe Segmentation With Probabilistic Segmentation of the Fissures and a Groupwise Fissure Prior.

Authors:  Felix J S Bragman; Jamie R McClelland; Joseph Jacob; John R Hurst; David J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  2017-04-18       Impact factor: 10.048

10.  Assessment of lung volume collapsibility in chronic obstructive lung disease patients using CT.

Authors:  Shinjini Kundu; Suicheng Gu; Joseph K Leader; John R Tedrow; Frank C Sciurba; David Gur; Naftali Kaminski; Jiantao Pu
Journal:  Eur Radiol       Date:  2013-03-15       Impact factor: 5.315

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