Literature DB >> 19625638

The TRANSPORT INHIBITOR RESPONSE2 gene is required for auxin synthesis and diverse aspects of plant development.

Masashi Yamada1, Katie Greenham, Michael J Prigge, Philip J Jensen, Mark Estelle.   

Abstract

The plant hormone auxin plays an essential role in plant development. However, only a few auxin biosynthetic genes have been isolated and characterized. Here, we show that the TRANSPORT INHIBITOR RESPONSE2 (TIR2) gene is required for many growth processes. Our studies indicate that the tir2 mutant is hypersensitive to 5-methyl-tryptophan, an inhibitor of tryptophan synthesis. Further, treatment with the proposed auxin biosynthetic intermediate indole-3-pyruvic acid (IPA) and indole-3-acetic acid rescues the tir2 short hypocotyl phenotype, suggesting that tir2 may be affected in the IPA auxin biosynthetic pathway. Molecular characterization revealed that TIR2 is identical to the TAA1 gene encoding a tryptophan aminotransferase. We show that TIR2 is regulated by temperature and is required for temperature-dependent hypocotyl elongation. Further, we find that expression of TIR2 is induced on the lower side of a gravitropically responding root. We propose that TIR2 contributes to a positive regulatory loop required for root gravitropism.

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Year:  2009        PMID: 19625638      PMCID: PMC2735986          DOI: 10.1104/pp.109.138859

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  45 in total

1.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

2.  Auxin biosynthesis by the YUCCA flavin monooxygenases controls the formation of floral organs and vascular tissues in Arabidopsis.

Authors:  Youfa Cheng; Xinhua Dai; Yunde Zhao
Journal:  Genes Dev       Date:  2006-07-01       Impact factor: 11.361

Review 3.  Molecular and cellular aspects of auxin-transport-mediated development.

Authors:  Anne Vieten; Michael Sauer; Philip B Brewer; Jirí Friml
Journal:  Trends Plant Sci       Date:  2007-03-21       Impact factor: 18.313

4.  Arabidopsis cytochrome P450s that catalyze the first step of tryptophan-dependent indole-3-acetic acid biosynthesis.

Authors:  A K Hull; R Vij; J L Celenza
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

5.  Sites and regulation of auxin biosynthesis in Arabidopsis roots.

Authors:  Karin Ljung; Anna K Hull; John Celenza; Masashi Yamada; Mark Estelle; Jennifer Normanly; Göran Sandberg
Journal:  Plant Cell       Date:  2005-03-16       Impact factor: 11.277

6.  BIG: a calossin-like protein required for polar auxin transport in Arabidopsis.

Authors:  P Gil; E Dewey; J Friml; Y Zhao; K C Snowden; J Putterill; K Palme; M Estelle; J Chory
Journal:  Genes Dev       Date:  2001-08-01       Impact factor: 11.361

7.  A Link between ethylene and auxin uncovered by the characterization of two root-specific ethylene-insensitive mutants in Arabidopsis.

Authors:  Anna N Stepanova; Joyce M Hoyt; Alexandra A Hamilton; Jose M Alonso
Journal:  Plant Cell       Date:  2005-06-24       Impact factor: 11.277

8.  AtPIN2 defines a locus of Arabidopsis for root gravitropism control.

Authors:  A Müller; C Guan; L Gälweiler; P Tänzler; P Huijser; A Marchant; G Parry; M Bennett; E Wisman; K Palme
Journal:  EMBO J       Date:  1998-12-01       Impact factor: 11.598

9.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

10.  TAA1-mediated auxin biosynthesis is essential for hormone crosstalk and plant development.

Authors:  Anna N Stepanova; Joyce Robertson-Hoyt; Jeonga Yun; Larissa M Benavente; De-Yu Xie; Karel Dolezal; Alexandra Schlereth; Gerd Jürgens; Jose M Alonso
Journal:  Cell       Date:  2008-04-04       Impact factor: 41.582

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  65 in total

1.  Phytochrome-interacting factor 4 (PIF4) regulates auxin biosynthesis at high temperature.

Authors:  Keara A Franklin; Sang Ho Lee; Dhaval Patel; S Vinod Kumar; Angela K Spartz; Chen Gu; Songqing Ye; Peng Yu; Gordon Breen; Jerry D Cohen; Philip A Wigge; William M Gray
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-28       Impact factor: 11.205

2.  NPY genes play an essential role in root gravitropic responses in Arabidopsis.

Authors:  Yuanting Li; Xinhua Dai; Youfa Cheng; Yunde Zhao
Journal:  Mol Plant       Date:  2010-09-10       Impact factor: 13.164

3.  Auxins reverse plant male sterility caused by high temperatures.

Authors:  Tadashi Sakata; Takeshi Oshino; Shinya Miura; Mari Tomabechi; Yuta Tsunaga; Nahoko Higashitani; Yutaka Miyazawa; Hideyuki Takahashi; Masao Watanabe; Atsushi Higashitani
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-26       Impact factor: 11.205

Review 4.  Auxin control of root development.

Authors:  Paul Overvoorde; Hidehiro Fukaki; Tom Beeckman
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-04-28       Impact factor: 10.005

Review 5.  Auxin activity: Past, present, and future.

Authors:  Tara A Enders; Lucia C Strader
Journal:  Am J Bot       Date:  2015-01-29       Impact factor: 3.844

6.  Transcriptional feedback regulation of YUCCA genes in response to auxin levels in Arabidopsis.

Authors:  Masashi Suzuki; Chiaki Yamazaki; Marie Mitsui; Yusuke Kakei; Yuka Mitani; Ayako Nakamura; Takahiro Ishii; Kazuo Soeno; Yukihisa Shimada
Journal:  Plant Cell Rep       Date:  2015-04-23       Impact factor: 4.570

7.  Auxin biosynthesis.

Authors:  Yunde Zhao
Journal:  Arabidopsis Book       Date:  2014-06-13

8.  Root Gravitropism Is Regulated by a Crosstalk between para-Aminobenzoic Acid, Ethylene, and Auxin.

Authors:  Hugues Nziengui; Hanna Lasok; Philip Kochersperger; Benedetto Ruperti; Fabrice Rébeillé; Klaus Palme; Franck Anicet Ditengou
Journal:  Plant Physiol       Date:  2018-10-01       Impact factor: 8.340

Review 9.  Auxin biosynthesis and storage forms.

Authors:  David A Korasick; Tara A Enders; Lucia C Strader
Journal:  J Exp Bot       Date:  2013-04-11       Impact factor: 6.992

10.  Identification of cytokinin-responsive genes using microarray meta-analysis and RNA-Seq in Arabidopsis.

Authors:  Apurva Bhargava; Ivory Clabaugh; Jenn P To; Bridey B Maxwell; Yi-Hsuan Chiang; G Eric Schaller; Ann Loraine; Joseph J Kieber
Journal:  Plant Physiol       Date:  2013-03-22       Impact factor: 8.340

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