Literature DB >> 19623771

Stroma classification for neuroblastoma on graphics processors.

Antonio Ruiz1, Olcay Sertel, Manuel Ujaldón, Umit Catalyurek, Joel Saltz, Metin N Gurcan.   

Abstract

Neuroblastoma is one of the most common childhood cancers. We are developing an image analysis system to assist pathologists in their prognosis. Since this system operates on relatively large-scale images and requires sophisticated algorithms, computerised analysis takes a long time to execute. In this paper, we propose a novel approach to benefit from high memory bandwidth and strong floating-point capabilities of graphics processing units. The proposed approach achieves a promising classification accuracy of 99.4% and an execution performance with a gain factor up to 45 times compared to hand-optimised C++ code running on the CPU.

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Year:  2009        PMID: 19623771     DOI: 10.1504/ijdmb.2009.026702

Source DB:  PubMed          Journal:  Int J Data Min Bioinform        ISSN: 1748-5673            Impact factor:   0.667


  6 in total

1.  Advancing Clinicopathologic Diagnosis of High-risk Neuroblastoma Using Computerized Image Analysis and Proteomic Profiling.

Authors:  M Khalid Khan Niazi; Jonathan H Chung; Katherine J Heaton-Johnson; Daniel Martinez; Raquel Castellanos; Meredith S Irwin; Stephen R Master; Bruce R Pawel; Metin N Gurcan; Daniel A Weiser
Journal:  Pediatr Dev Pathol       Date:  2017-04-18

2.  Computer-aided Prognosis of Neuroblastoma on Whole-slide Images: Classification of Stromal Development.

Authors:  O Sertel; J Kong; H Shimada; U V Catalyurek; J H Saltz; M N Gurcan
Journal:  Pattern Recognit       Date:  2009-06       Impact factor: 7.740

3.  Digital pathology image analysis: opportunities and challenges.

Authors:  Anant Madabhushi
Journal:  Imaging Med       Date:  2009

4.  A multi-resolution textural approach to diagnostic neuropathology reporting.

Authors:  Mohammad Faizal Ahmad Fauzi; Hamza Numan Gokozan; Brad Elder; Vinay K Puduvalli; Christopher R Pierson; José Javier Otero; Metin N Gurcan
Journal:  J Neurooncol       Date:  2015-08-09       Impact factor: 4.130

5.  An Efficient Computational Framework for the Analysis of Whole Slide Images: Application to Follicular Lymphoma Immunohistochemistry.

Authors:  Siddharth Samsi; Ashok K Krishnamurthy; Metin N Gurcan
Journal:  J Comput Sci       Date:  2012-03-06

6.  Multimodality GPU-based computer-assisted diagnosis of breast cancer using ultrasound and digital mammography images.

Authors:  Konstantinos P Sidiropoulos; Spiros A Kostopoulos; Dimitris T Glotsos; Emmanouil I Athanasiadis; Nikos D Dimitropoulos; John T Stonham; Dionisis A Cavouras
Journal:  Int J Comput Assist Radiol Surg       Date:  2013-01-25       Impact factor: 2.924

  6 in total

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