Literature DB >> 19616103

Cryo-X-ray tomography of vaccinia virus membranes and inner compartments.

José L Carrascosa1, Francisco Javier Chichón, Eva Pereiro, María Josefa Rodríguez, Jose Jesús Fernández, Mariano Esteban, Stefan Heim, Peter Guttmann, Gerd Schneider.   

Abstract

Vitrified unstained purified vaccinia virus particles have been used as a test sample to evaluate the capabilities of cryo-X-ray tomography. Embedded in a thick layer of vitreous ice, the viral particles representing the mature form of the virus (MV) were visualized using full-field transmission X-ray tomography. The tomographic reconstructions reveal the viral brick-shaped characteristic structures with a size of 250x270x360nm(3). The X-ray tomograms show the presence of a clearly defined external envelope, together with an inner core surrounded by an internal envelope, including areas with clear differential density, which correlate well with those features previously described for these viral particles using electron microscopy analyses. A quantitative assessment of the resolution attained in X-ray and electron tomograms of the viral particles prepared under the same conditions yields values of 25.7 and 6.7nm half-pitch, respectively. Although the resolution of the X-ray microscope is well above the dimensions of the membranous compartments, the strong differential contrast exhibited makes it possible to precisely reveal them without any contrasting reagent within this small and complex biological sample.

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Year:  2009        PMID: 19616103     DOI: 10.1016/j.jsb.2009.07.009

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  27 in total

1.  Three-dimensional imaging of human stem cells using soft X-ray tomography.

Authors:  J C Niclis; S V Murphy; D Y Parkinson; A Zedan; A H Sathananthan; D S Cram; P Heraud
Journal:  J R Soc Interface       Date:  2015-07-06       Impact factor: 4.118

Review 2.  Sample preparation strategies for efficient correlation of 3D SIM and soft X-ray tomography data at cryogenic temperatures.

Authors:  Chidinma A Okolo; Ilias Kounatidis; Johannes Groen; Kamal L Nahas; Stefan Balint; Thomas M Fish; Mohamed A Koronfel; Aitziber L Cortajarena; Ian M Dobbie; Eva Pereiro; Maria Harkiolaki
Journal:  Nat Protoc       Date:  2021-05-14       Impact factor: 13.491

Review 3.  Assaying three-dimensional cellular architecture using X-ray tomographic and correlated imaging approaches.

Authors:  Peter O Bayguinov; Max R Fisher; James A J Fitzpatrick
Journal:  J Biol Chem       Date:  2020-09-16       Impact factor: 5.157

4.  Quantitative three-dimensional nondestructive imaging of whole anaerobic ammonium-oxidizing bacteria.

Authors:  Meng Wen Peng; Yong Guan; Jian Hong Liu; Liang Chen; Han Wang; Zheng Zhe Xie; Hai Yan Li; You Peng Chen; Peng Liu; Peng Yan; Jin Song Guo; Gang Liu; Yu Shen; Fang Fang
Journal:  J Synchrotron Radiat       Date:  2020-04-17       Impact factor: 2.616

Review 5.  Transmission X-ray microscopy for full-field nano imaging of biomaterials.

Authors:  Joy C Andrews; Florian Meirer; Yijin Liu; Zoltan Mester; Piero Pianetta
Journal:  Microsc Res Tech       Date:  2010-08-23       Impact factor: 2.769

Review 6.  Imaging cellular architecture with X-rays.

Authors:  Carolyn A Larabell; Keith A Nugent
Journal:  Curr Opin Struct Biol       Date:  2010-09-24       Impact factor: 6.809

7.  Towards an atlas of mammalian cell ultrastructure by cryo soft X-ray tomography.

Authors:  Waltraud G Müller; J Bernard Heymann; Kunio Nagashima; Peter Guttmann; Stephan Werner; Stefan Rehbein; Gerd Schneider; James G McNally
Journal:  J Struct Biol       Date:  2011-12-02       Impact factor: 2.867

8.  Automatic alignment and reconstruction of images for soft X-ray tomography.

Authors:  Dilworth Y Parkinson; Christian Knoechel; Chao Yang; Carolyn A Larabell; Mark A Le Gros
Journal:  J Struct Biol       Date:  2011-12-02       Impact factor: 2.867

9.  Correlative VIS-fluorescence and soft X-ray cryo-microscopy/tomography of adherent cells.

Authors:  Christoph Hagen; Peter Guttmann; Barbara Klupp; Stephan Werner; Stefan Rehbein; Thomas C Mettenleiter; Gerd Schneider; Kay Grünewald
Journal:  J Struct Biol       Date:  2011-12-24       Impact factor: 2.867

10.  3D Ultrastructural organization of whole Chlamydomonas reinhardtii cells studied by nanoscale soft x-ray tomography.

Authors:  Eric Hummel; Peter Guttmann; Stephan Werner; Basel Tarek; Gerd Schneider; Michael Kunz; Achilleas S Frangakis; Benedikt Westermann
Journal:  PLoS One       Date:  2012-12-31       Impact factor: 3.240

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