Literature DB >> 19609767

Reliable method for detection of programmed cell death in yeast.

Xinchen Teng1, J Marie Hardwick.   

Abstract

Accumulating evidence suggests that yeasts are capable of undergoing programmed cell death (PCD) to benefit long-term survival of the species, and that yeast and mammals may share at least partially conserved PCD pathways. In our experience, mammalian apoptosis assays have not been readily applicable to yeast. Therefore, to take advantage of yeast as a genetic tool to study PCD, we developed a yeast cell death assay that can reliably reveal viability differences between wild-type strains and strains lacking the mitochondrial fission genes DNM1/Drp1 and FIS1, orthologs of mammalian cell death regulators. Cell viability following treatment with acetic acid is quantified by colony formation and vital dye (FUN1) staining to reproducibly detect dose-dependent, genetically programmed yeast cell death.

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Year:  2009        PMID： 19609767      PMCID： PMC3068845          DOI： 10.1007/978-1-60327-017-5_23

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  27 in total

1.  Pheromone induces programmed cell death in S. cerevisiae.

Authors:  F F Severin; A A Hyman
Journal:  Curr Biol       Date:  2002-04-02       Impact factor: 10.834

2.  Assessment of mitochondrial membrane potential in yeast cell populations by flow cytometry.

Authors:  P Ludovico; F Sansonetty; M Côrte-Real
Journal:  Microbiology       Date:  2001-12       Impact factor: 2.777

3.  A caspase-related protease regulates apoptosis in yeast.

Authors:  Frank Madeo; Eva Herker; Corinna Maldener; Silke Wissing; Stephan Lächelt; Mark Herlan; Markus Fehr; Kirsten Lauber; Stephan J Sigrist; Sebastian Wesselborg; Kai Uwe Fröhlich
Journal:  Mol Cell       Date:  2002-04       Impact factor: 17.970

4.  Participation of Bir1p, a member of the inhibitor of apoptosis family, in yeast chromosome segregation events.

Authors:  H J Yoon; J Carbon
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-09       Impact factor: 11.205

5.  The role of dynamin-related protein 1, a mediator of mitochondrial fission, in apoptosis.

Authors:  S Frank; B Gaume; E S Bergmann-Leitner; W W Leitner; E G Robert; F Catez; C L Smith; R J Youle
Journal:  Dev Cell       Date:  2001-10       Impact factor: 12.270

6.  Salt causes ion disequilibrium-induced programmed cell death in yeast and plants.

Authors:  Gyung-Hye Huh; Barbara Damsz; Tracie K Matsumoto; Muppala P Reddy; Ana M Rus; José I Ibeas; Meena L Narasimhan; Ray A Bressan; Paul M Hasegawa
Journal:  Plant J       Date:  2002-03       Impact factor: 6.417

7.  Bcl-x(L) complements Saccharomyces cerevisiae genes that facilitate the switch from glycolytic to oxidative metabolism.

Authors:  Matthew G Vander Heiden; John S Choy; David J VanderWeele; Jennifer L Brace; Marian H Harris; Daniel E Bauer; Bryan Prange; Stephen J Kron; Craig B Thompson; Charles M Rudin
Journal:  J Biol Chem       Date:  2002-09-19       Impact factor: 5.157

Review 8.  Yeast as a tool to study Bax/mitochondrial interactions in cell death.

Authors:  Muriel Priault; Nadine Camougrand; Kathleen W Kinnally; François M Vallette; Stéphen Manon
Journal:  FEMS Yeast Res       Date:  2003-10       Impact factor: 2.796

9.  Cytochrome c release and mitochondria involvement in programmed cell death induced by acetic acid in Saccharomyces cerevisiae.

Authors:  Paula Ludovico; Fernando Rodrigues; Agostinho Almeida; Manuel T Silva; Antoni Barrientos; Manuela Côrte-Real
Journal:  Mol Biol Cell       Date:  2002-08       Impact factor: 4.138

10.  Fis1 deficiency selects for compensatory mutations responsible for cell death and growth control defects.

Authors:  W-C Cheng; X Teng; H K Park; C M Tucker; M J Dunham; J M Hardwick
Journal:  Cell Death Differ       Date:  2008-08-29       Impact factor: 15.828
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  10 in total

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Journal:  J Biol Chem       Date:  2014-03-06       Impact factor: 5.157

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Authors:  António Rego; António Ribeiro; Manuela Côrte-Real; Susana Rodrigues Chaves
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Journal:  Nat Chem Biol       Date:  2022-08-11       Impact factor: 16.174

4.  Quantification of genetically controlled cell death in budding yeast.

Authors:  Xinchen Teng; J Marie Hardwick
Journal:  Methods Mol Biol       Date:  2013

5.  Gene-dependent cell death in yeast.

Authors:  X Teng; W-C Cheng; B Qi; T-X Yu; K Ramachandran; M D Boersma; T Hattier; P V Lehmann; F J Pineda; J M Hardwick
Journal:  Cell Death Dis       Date:  2011-08-04       Impact factor: 8.469

Review 6.  Lipids and cell death in yeast.

Authors:  Tobias Eisenberg; Sabrina Büttner
Journal:  FEMS Yeast Res       Date:  2013-10-30       Impact factor: 2.796

Review 7.  Guidelines and recommendations on yeast cell death nomenclature.

Authors:  Didac Carmona-Gutierrez; Maria Anna Bauer; Andreas Zimmermann; Andrés Aguilera; Nicanor Austriaco; Kathryn Ayscough; Rena Balzan; Shoshana Bar-Nun; Antonio Barrientos; Peter Belenky; Marc Blondel; Ralf J Braun; Michael Breitenbach; William C Burhans; Sabrina Büttner; Duccio Cavalieri; Michael Chang; Katrina F Cooper; Manuela Côrte-Real; Vítor Costa; Christophe Cullin; Ian Dawes; Jörn Dengjel; Martin B Dickman; Tobias Eisenberg; Birthe Fahrenkrog; Nicolas Fasel; Kai-Uwe Fröhlich; Ali Gargouri; Sergio Giannattasio; Paola Goffrini; Campbell W Gourlay; Chris M Grant; Michael T Greenwood; Nicoletta Guaragnella; Thomas Heger; Jürgen Heinisch; Eva Herker; Johannes M Herrmann; Sebastian Hofer; Antonio Jiménez-Ruiz; Helmut Jungwirth; Katharina Kainz; Dimitrios P Kontoyiannis; Paula Ludovico; Stéphen Manon; Enzo Martegani; Cristina Mazzoni; Lynn A Megeney; Chris Meisinger; Jens Nielsen; Thomas Nyström; Heinz D Osiewacz; Tiago F Outeiro; Hay-Oak Park; Tobias Pendl; Dina Petranovic; Stephane Picot; Peter Polčic; Ted Powers; Mark Ramsdale; Mark Rinnerthaler; Patrick Rockenfeller; Christoph Ruckenstuhl; Raffael Schaffrath; Maria Segovia; Fedor F Severin; Amir Sharon; Stephan J Sigrist; Cornelia Sommer-Ruck; Maria João Sousa; Johan M Thevelein; Karin Thevissen; Vladimir Titorenko; Michel B Toledano; Mick Tuite; F-Nora Vögtle; Benedikt Westermann; Joris Winderickx; Silke Wissing; Stefan Wölfl; Zhaojie J Zhang; Richard Y Zhao; Bing Zhou; Lorenzo Galluzzi; Guido Kroemer; Frank Madeo
Journal:  Microb Cell       Date:  2018-01-01

8.  Identification of Genes Regulating Cell Death in Staphylococcus aureus.

Authors:  Rebecca Yee; Jie Feng; Jiou Wang; Jiazhen Chen; Ying Zhang
Journal:  Front Microbiol       Date:  2019-10-01       Impact factor: 5.640

9.  Yeast cell death pathway requiring AP-3 vesicle trafficking leads to vacuole/lysosome membrane permeabilization.

Authors:  Zachary D Stolp; Madhura Kulkarni; Yining Liu; Chengzhang Zhu; Alizay Jalisi; Si Lin; Arturo Casadevall; Kyle W Cunningham; Fernando J Pineda; Xinchen Teng; J Marie Hardwick
Journal:  Cell Rep       Date:  2022-04-12       Impact factor: 9.995

10.  Protein cofactor competition regulates the action of a multifunctional RNA helicase in different pathways.

Authors:  Annika U Heininger; Philipp Hackert; Alexandra Z Andreou; Kum-Loong Boon; Indira Memet; Mira Prior; Anne Clancy; Bernhard Schmidt; Henning Urlaub; Enrico Schleiff; Katherine E Sloan; Markus Deckers; Reinhard Lührmann; Jörg Enderlein; Dagmar Klostermeier; Peter Rehling; Markus T Bohnsack
Journal:  RNA Biol       Date:  2016-01-29       Impact factor: 4.652
  10 in total

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