Literature DB >> 19606816

Directed hybridization and melting of DNA linkers using counterion-screened electric fields.

Ian Y Wong1, Nicholas A Melosh.   

Abstract

Dynamic self-assembly using responsive, "smart" materials such as DNA is a promising route toward reversible assembly and patterning of nanostructures for error-corrected fabrication, enhanced biosensors, drug delivery and gene therapy. DNA linkers were designed with strategically placed mismatches, allowing rapid attachment and release from a surface in a counterion-screened electric field. These electrostatic fields are inherently highly localized, directing assembly with nanometer precision while avoiding harmful electrochemical reactions. We show that depending on the sign of the applied field, the DNA hybridization density is strongly enhanced or diminished due to the high negative charge density of immobilized DNA. This use of dynamic fields rather than static templates enables fabrication of heterogeneously hybridized electrodes with different functional moieties, despite the use of identical linker sequences.

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Year:  2009        PMID: 19606816     DOI: 10.1021/nl901710n

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  14 in total

1.  An electrostatic model for DNA surface hybridization.

Authors:  Ian Y Wong; Nicholas A Melosh
Journal:  Biophys J       Date:  2010-06-16       Impact factor: 4.033

2.  3D single-molecule tracking enables direct hybridization kinetics measurement in solution.

Authors:  Cong Liu; Judy M Obliosca; Yen-Liang Liu; Yu-An Chen; Ning Jiang; Hsin-Chih Yeh
Journal:  Nanoscale       Date:  2017-05-04       Impact factor: 7.790

3.  The Role of Structural Enthalpy in Spherical Nucleic Acid Hybridization.

Authors:  Lam-Kiu Fong; Ziwei Wang; George C Schatz; Erik Luijten; Chad A Mirkin
Journal:  J Am Chem Soc       Date:  2018-05-15       Impact factor: 15.419

4.  Determining the Locations of Ions and Water around DNA from X-Ray Scattering Measurements.

Authors:  Steve P Meisburger; Suzette A Pabit; Lois Pollack
Journal:  Biophys J       Date:  2015-06-16       Impact factor: 4.033

Review 5.  Functionalized gold nanoparticles for the binding, stabilization, and delivery of therapeutic DNA, RNA, and other biological macromolecules.

Authors:  Robert K Delong; Christopher M Reynolds; Yaneika Malcolm; Ashley Schaeffer; Tiffany Severs; Adam Wanekaya
Journal:  Nanotechnol Sci Appl       Date:  2010-09-20

6.  Sorting short fragments of single-stranded DNA with an evolving electric double layer.

Authors:  Jiamin Wu; Shuang-Liang Zhao; Lizeng Gao; Jianzhong Wu; Di Gao
Journal:  J Phys Chem B       Date:  2013-02-14       Impact factor: 2.991

7.  Structural Characterization of Single-Stranded DNA Monolayers Using Two-Dimensional Sum Frequency Generation Spectroscopy.

Authors:  Jia-Jung Ho; David R Skoff; Ayanjeet Ghosh; Martin T Zanni
Journal:  J Phys Chem B       Date:  2015-08-10       Impact factor: 2.991

8.  BioFET-SIM web interface: implementation and two applications.

Authors:  Martin R Hediger; Jan H Jensen; Luca De Vico
Journal:  PLoS One       Date:  2012-10-08       Impact factor: 3.240

9.  Electrochemical Characteristics of a DNA Modified Electrode as a Function of Percent Binding.

Authors:  Rahul Tevatia; Abhijeet Prasad; Ravi F Saraf
Journal:  Anal Chem       Date:  2019-07-30       Impact factor: 8.008

10.  Elementary processes of DNA surface hybridization resolved by single-molecule kinetics: implication for macroscopic device performance.

Authors:  Takanori Harashima; Yusuke Hasegawa; Satoshi Kaneko; Yuki Jono; Shintaro Fujii; Manabu Kiguchi; Tomoaki Nishino
Journal:  Chem Sci       Date:  2020-12-22       Impact factor: 9.825

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