Literature DB >> 19606267

Approaches to Information-Theoretic Analysis of Neural Activity.

Jonathan D Victor1.   

Abstract

Understanding how neurons represent, process, and manipulate information is one of the main goals of neuroscience. These issues are fundamentally abstract, and information theory plays a key role in formalizing and addressing them. However, application of information theory to experimental data is fraught with many challenges. Meeting these challenges has led to a variety of innovative analytical techniques, with complementary domains of applicability, assumptions, and goals.

Year:  2006        PMID： 19606267      PMCID： PMC2709861          DOI： 10.1162/biot.2006.1.3.302

Source DB:  PubMed          Journal:  Biol Theory        ISSN： 1555-5542


  79 in total

1.  A unified approach to the study of temporal, correlational, and rate coding.

Authors:  S Panzeri; S R Schultz
Journal:  Neural Comput       Date:  2001-06       Impact factor: 2.026

2.  The simultaneous coding of orientation and contrast in the responses of V1 complex cells.

Authors:  T J Gawne
Journal:  Exp Brain Res       Date:  2000-08       Impact factor: 1.972

3.  Fast algorithm for the metric-space analysis of simultaneous responses of multiple single neurons.

Authors:  Dmitriy Aronov
Journal:  J Neurosci Methods       Date:  2003-04-15       Impact factor: 2.390

4.  Estimating mutual information.

Authors:  Alexander Kraskov; Harald Stögbauer; Peter Grassberger
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-06-23

5.  Weak pairwise correlations imply strongly correlated network states in a neural population.

Authors:  Elad Schneidman; Michael J Berry; Ronen Segev; William Bialek
Journal:  Nature       Date:  2006-04-09       Impact factor: 49.962

6.  Paired-spike interactions and synaptic efficacy of retinal inputs to the thalamus.

Authors:  W M Usrey; J B Reppas; R C Reid
Journal:  Nature       Date:  1998-09-24       Impact factor: 49.962

7.  Decoding synapses.

Authors:  K Sen; J C Jorge-Rivera; E Marder; L F Abbott
Journal:  J Neurosci       Date:  1996-10-01       Impact factor: 6.167

8.  Temporal encoding of two-dimensional patterns by single units in primate inferior temporal cortex. III. Information theoretic analysis.

Authors:  L M Optican; B J Richmond
Journal:  J Neurophysiol       Date:  1987-01       Impact factor: 2.714

9.  Neural mechanisms for forming a perceptual decision.

Authors:  C D Salzman; W T Newsome
Journal:  Science       Date:  1994-04-08       Impact factor: 47.728

Review 10.  Molecular machines integrate coincident synaptic signals.

Authors:  H R Bourne; R Nicoll
Journal:  Cell       Date:  1993-01       Impact factor: 41.582
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  23 in total

1.  Spike train analysis toolkit: enabling wider application of information-theoretic techniques to neurophysiology.

Authors:  David H Goldberg; Jonathan D Victor; Esther P Gardner; Daniel Gardner
Journal:  Neuroinformatics       Date:  2009-05-28

Review 2.  Synergy, redundancy, and multivariate information measures: an experimentalist's perspective.

Authors:  Nicholas Timme; Wesley Alford; Benjamin Flecker; John M Beggs
Journal:  J Comput Neurosci       Date:  2013-07-03       Impact factor: 1.621

Review 3.  A Tutorial for Information Theory in Neuroscience.

Authors:  Nicholas M Timme; Christopher Lapish
Journal:  eNeuro       Date:  2018-09-11

4.  Limitations to Estimating Mutual Information in Large Neural Populations.

Authors:  Jan Mölter; Geoffrey J Goodhill
Journal:  Entropy (Basel)       Date:  2020-04-24       Impact factor: 2.524

5.  Synaptic information transfer in computer models of neocortical columns.

Authors:  Samuel A Neymotin; Kimberle M Jacobs; André A Fenton; William W Lytton
Journal:  J Comput Neurosci       Date:  2010-06-17       Impact factor: 1.621

6.  Ideal observer analysis of signal quality in retinal circuits.

Authors:  Robert G Smith; Narender K Dhingra
Journal:  Prog Retin Eye Res       Date:  2009-05-13       Impact factor: 21.198

7.  Open source tools for the information theoretic analysis of neural data.

Authors:  Robin A A Ince; Alberto Mazzoni; Rasmus S Petersen; Stefano Panzeri
Journal:  Front Neurosci       Date:  2010-05-15       Impact factor: 4.677

8.  Information in the nonstationary case.

Authors:  Vincent Q Vu; Bin Yu; Robert E Kass
Journal:  Neural Comput       Date:  2009-03       Impact factor: 2.026

9.  A Model-Free Scheme for Meme Ranking in Social Media.

Authors:  Saike He; Xiaolong Zheng; Daniel Zeng
Journal:  Decis Support Syst       Date:  2015-10-13       Impact factor: 5.795

10.  A toolbox for the fast information analysis of multiple-site LFP, EEG and spike train recordings.

Authors:  Cesare Magri; Kevin Whittingstall; Vanessa Singh; Nikos K Logothetis; Stefano Panzeri
Journal:  BMC Neurosci       Date:  2009-07-16       Impact factor: 3.288
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