Literature DB >> 19595801

Characterisation of dihydrodipicolinate synthase (DHDPS) from Bacillus anthracis.

L J Domigan1, S W Scally, M J Fogg, C A Hutton, M A Perugini, R C J Dobson, A C Muscroft-Taylor, J A Gerrard, S R A Devenish.   

Abstract

Bacillus anthracis is a Gram-positive spore-forming bacterium that is the causative agent of anthrax disease. The use of anthrax as a bioweapon has increased pressure for the development of an effective treatment. Dihydrodipicolinate synthase (DHDPS) catalyses the first committed step in the biosynthetic pathway yielding two essential bacterial metabolites, meso-diaminopimelate (DAP) and (S)-lysine. DHDPS is therefore a potential antibiotic target, as microbes require either lysine or DAP as a component of the cell wall. This paper is the first biochemical description of DHDPS from B. anthracis. Enzyme kinetic analyses, isothermal titration calorimetry (ITC), mass spectrometry and differential scanning fluorimetry (DSF) were used to characterise B. anthracis DHDPS and compare it with the well characterised Escherichia coli enzyme. B. anthracis DHDPS exhibited different kinetic behaviour compared with E. coli DHDPS, in particular, substrate inhibition by (S)-aspartate semi-aldehyde was observed for the B. anthracis enzyme (K(si(ASA))=5.4+/-0.5 mM), but not for the E. coli enzyme. As predicted from a comparison of the X-ray crystal structures, the B. anthracis enzyme was not inhibited by lysine. The B. anthracis enzyme was thermally stabilised by the first substrate, pyruvate, to a greater extent than its E. coli counterpart, but has a weaker affinity for pyruvate based on enzyme kinetics and ITC studies. This characterisation will provide useful information for the design of inhibitors as new antibiotics targeting B. anthracis.

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Year:  2009        PMID: 19595801     DOI: 10.1016/j.bbapap.2009.06.020

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  8 in total

1.  Cloning, expression, purification and crystallization of dihydrodipicolinate synthase from the grapevine Vitis vinifera.

Authors:  Sarah C Atkinson; Con Dogovski; Janet Newman; Renwick C J Dobson; Matthew A Perugini
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-25

2.  Crystallization and preliminary X-ray diffraction analysis of L,L-diaminopimelate aminotransferase (DapL) from Chlamydomonas reinhardtii.

Authors:  André O Hudson; Irma Girón; Renwick C J Dobson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-12-24

Review 3.  Molecular evolution of an oligomeric biocatalyst functioning in lysine biosynthesis.

Authors:  Tatiana P Soares da Costa; Belinda M Abbott; Anthony R Gendall; Santosh Panjikar; Matthew A Perugini
Journal:  Biophys Rev       Date:  2017-12-05

4.  Substrate-mediated stabilization of a tetrameric drug target reveals Achilles heel in anthrax.

Authors:  Jarrod E Voss; Stephen W Scally; Nicole L Taylor; Sarah C Atkinson; Michael D W Griffin; Craig A Hutton; Michael W Parker; Malcolm R Alderton; Juliet A Gerrard; Renwick C J Dobson; Con Dogovski; Matthew A Perugini
Journal:  J Biol Chem       Date:  2009-11-30       Impact factor: 5.157

5.  Structural, kinetic and computational investigation of Vitis vinifera DHDPS reveals new insight into the mechanism of lysine-mediated allosteric inhibition.

Authors:  Sarah C Atkinson; Con Dogovski; Matthew T Downton; Peter E Czabotar; Renwick C J Dobson; Juliet A Gerrard; John Wagner; Matthew A Perugini
Journal:  Plant Mol Biol       Date:  2013-01-26       Impact factor: 4.076

6.  Crystal, solution and in silico structural studies of dihydrodipicolinate synthase from the common grapevine.

Authors:  Sarah C Atkinson; Con Dogovski; Matthew T Downton; F Grant Pearce; Cyril F Reboul; Ashley M Buckle; Juliet A Gerrard; Renwick C J Dobson; John Wagner; Matthew A Perugini
Journal:  PLoS One       Date:  2012-06-25       Impact factor: 3.240

7.  Integrated metagenomic and metatranscriptomic analyses of microbial communities in the meso- and bathypelagic realm of north pacific ocean.

Authors:  Jieying Wu; Weimin Gao; Roger H Johnson; Weiwen Zhang; Deirdre R Meldrum
Journal:  Mar Drugs       Date:  2013-10-11       Impact factor: 5.118

8.  From knock-out phenotype to three-dimensional structure of a promising antibiotic target from Streptococcus pneumoniae.

Authors:  Con Dogovski; Michael A Gorman; Natalia E Ketaren; Judy Praszkier; Leanne M Zammit; Haydyn D Mertens; Gary Bryant; Ji Yang; Michael D W Griffin; F Grant Pearce; Juliet A Gerrard; Geoffrey B Jameson; Michael W Parker; Roy M Robins-Browne; Matthew A Perugini
Journal:  PLoS One       Date:  2013-12-13       Impact factor: 3.240

  8 in total

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