Literature DB >> 19593405

A genomic score prognostic of outcome in trauma patients.

H Shaw Warren1, Constance M Elson, Douglas L Hayden, David A Schoenfeld, J Perren Cobb, Ronald V Maier, Lyle L Moldawer, Ernest E Moore, Brian G Harbrecht, Kimberly Pelak, Joseph Cuschieri, David N Herndon, Marc G Jeschke, Celeste C Finnerty, Bernard H Brownstein, Laura Hennessy, Philip H Mason, Ronald G Tompkins.   

Abstract

Traumatic injuries frequently lead to infection, organ failure, and death. Health care providers rely on several injury scoring systems to quantify the extent of injury and to help predict clinical outcome. Physiological, anatomical, and clinical laboratory analytic scoring systems (Acute Physiology and Chronic Health Evaluation [APACHE], Injury Severity Score [ISS]) are utilized, with limited success, to predict outcome following injury. The recent development of techniques for measuring the expression level of all of a person's genes simultaneously may make it possible to develop an injury scoring system based on the degree of gene activation. We hypothesized that a peripheral blood leukocyte gene expression score could predict outcome, including multiple organ failure, following severe blunt trauma. To test such a scoring system, we measured gene expression of peripheral blood leukocytes from patients within 12 h of traumatic injury. cRNA derived from whole blood leukocytes obtained within 12 h of injury provided gene expression data for the entire genome that were used to create a composite gene expression score for each patient. Total blood leukocytes were chosen because they are active during inflammation, which is reflective of poor outcome. The gene expression score combines the activation levels of all the genes into a single number which compares the patient's gene expression to the average gene expression in uninjured volunteers. Expression profiles from healthy volunteers were averaged to create a reference gene expression profile which was used to compute a difference from reference (DFR) score for each patient. This score described the overall genomic response of patients within the first 12 h following severe blunt trauma. Regression models were used to compare the association of the DFR, APACHE, and ISS scores with outcome. We hypothesized that patients with a total gene response more different from uninjured volunteers would tend to have poorer outcome than those more similar. Our data show that for measures of poor outcome, such as infections, organ failures, and length of hospital stay, this is correct. DFR scores were associated significantly with adverse outcome, including multiple organ failure, duration of ventilation, length of hospital stay, and infection rate. The association remained significant after adjustment for injury severity as measured by APACHE or ISS. A single score representing changes in gene expression in peripheral blood leukocytes within hours of severe blunt injury is associated with adverse clinical outcomes that develop later in the hospital course. Assessment of genome-wide gene expression provides useful clinical information that is different from that provided by currently utilized anatomic or physiologic scores.

Entities:  

Mesh:

Year:  2009        PMID: 19593405      PMCID: PMC2707513          DOI: 10.2119/molmed.2009.00027

Source DB:  PubMed          Journal:  Mol Med        ISSN: 1076-1551            Impact factor:   6.354


  21 in total

1.  Intra-observer variability in APACHE II scoring.

Authors:  K H Polderman; H M Christiaans; J P Wester; J J Spijkstra; A R Girbes
Journal:  Intensive Care Med       Date:  2001-09       Impact factor: 17.440

Review 2.  Current concepts of the inflammatory response after major trauma: an update.

Authors:  P V Giannoudis
Journal:  Injury       Date:  2003-06       Impact factor: 2.586

Review 3.  Posttraumatic multisystem organ failure.

Authors:  M M DeCamp; R H Demling
Journal:  JAMA       Date:  1988 Jul 22-29       Impact factor: 56.272

4.  The injury severity score: a method for describing patients with multiple injuries and evaluating emergency care.

Authors:  S P Baker; B O'Neill; W Haddon; W B Long
Journal:  J Trauma       Date:  1974-03

5.  APACHE II: a severity of disease classification system.

Authors:  W A Knaus; E A Draper; D P Wagner; J E Zimmerman
Journal:  Crit Care Med       Date:  1985-10       Impact factor: 7.598

6.  Early predictors of postinjury multiple organ failure.

Authors:  A Sauaia; F A Moore; E E Moore; J B Haenel; R A Read; D C Lezotte
Journal:  Arch Surg       Date:  1994-01

7.  The APACHE III prognostic system. Risk prediction of hospital mortality for critically ill hospitalized adults.

Authors:  W A Knaus; D P Wagner; E A Draper; J E Zimmerman; M Bergner; P G Bastos; C A Sirio; D J Murphy; T Lotring; A Damiano
Journal:  Chest       Date:  1991-12       Impact factor: 9.410

8.  Gene expression predictors of breast cancer outcomes.

Authors:  Erich Huang; Skye H Cheng; Holly Dressman; Jennifer Pittman; Mei Hua Tsou; Cheng Fang Horng; Andrea Bild; Edwin S Iversen; Ming Liao; Chii Ming Chen; Mike West; Joseph R Nevins; Andrew T Huang
Journal:  Lancet       Date:  2003-05-10       Impact factor: 79.321

9.  Incidence and patterns of violent and/or traumatic deaths between 1993 and 1999 in the Transkei region of South Africa.

Authors:  B L Meel
Journal:  J Trauma       Date:  2004-07

10.  Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection.

Authors:  C Li; W H Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

View more
  47 in total

1.  Aged mice are unable to mount an effective myeloid response to sepsis.

Authors:  Dina C Nacionales; Lori F Gentile; Erin Vanzant; M Cecilia Lopez; Angela Cuenca; Alex G Cuenca; Ricardo Ungaro; Yi Li; Tezcan Ozrazgat Baslanti; Azra Bihorac; Frederick A Moore; Henry V Baker; Christiaan Leeuwenburgh; Lyle L Moldawer; Philip A Efron
Journal:  J Immunol       Date:  2013-12-13       Impact factor: 5.422

Review 2.  Mechanisms and regulation of the gene-expression response to sepsis.

Authors:  Timothy T Cornell; James Wynn; Thomas P Shanley; Derek S Wheeler; Hector R Wong
Journal:  Pediatrics       Date:  2010-05-17       Impact factor: 7.124

Review 3.  From data patterns to mechanistic models in acute critical illness.

Authors:  Jean-Marie Aerts; Wassim M Haddad; Gary An; Yoram Vodovotz
Journal:  J Crit Care       Date:  2014-03-29       Impact factor: 3.425

4.  A comprehensive time-course-based multicohort analysis of sepsis and sterile inflammation reveals a robust diagnostic gene set.

Authors:  Timothy E Sweeney; Aaditya Shidham; Hector R Wong; Purvesh Khatri
Journal:  Sci Transl Med       Date:  2015-05-13       Impact factor: 17.956

5.  A recursively partitioned mixture model for clustering time-course gene expression data.

Authors:  Devin C Koestler; Carmen J Marsit; Brock C Christensen; Karl T Kelsey; E Andres Houseman
Journal:  Transl Cancer Res       Date:  2014       Impact factor: 1.241

6.  Genomics of injury: The Glue Grant experience.

Authors:  Ronald G Tompkins
Journal:  J Trauma Acute Care Surg       Date:  2015-04       Impact factor: 3.313

7.  Development of a genomic metric that can be rapidly used to predict clinical outcome in severely injured trauma patients.

Authors:  Alex G Cuenca; Lori F Gentile; M Cecilia Lopez; Ricardo Ungaro; Huazhi Liu; Wenzhong Xiao; Junhee Seok; Michael N Mindrinos; Darwin Ang; Tezcan Ozrazgat Baslanti; Azra Bihorac; Philip A Efron; Joseph Cuschieri; H Shaw Warren; Ronald G Tompkins; Ronald V Maier; Henry V Baker; Lyle L Moldawer
Journal:  Crit Care Med       Date:  2013-05       Impact factor: 7.598

8.  Developing a clinically feasible personalized medicine approach to pediatric septic shock.

Authors:  Hector R Wong; Natalie Z Cvijanovich; Nick Anas; Geoffrey L Allen; Neal J Thomas; Michael T Bigham; Scott L Weiss; Julie Fitzgerald; Paul A Checchia; Keith Meyer; Thomas P Shanley; Michael Quasney; Mark Hall; Rainer Gedeit; Robert J Freishtat; Jeffrey Nowak; Raj S Shekhar; Shira Gertz; Emily Dawson; Kelli Howard; Kelli Harmon; Eileen Beckman; Erin Frank; Christopher J Lindsell
Journal:  Am J Respir Crit Care Med       Date:  2015-02-01       Impact factor: 21.405

9.  Patterns of gene expression among murine models of hemorrhagic shock/trauma and sepsis.

Authors:  Juan C Mira; Benjamin E Szpila; Dina C Nacionales; Maria-Cecilia Lopez; Lori F Gentile; Brittany J Mathias; Erin L Vanzant; Ricardo Ungaro; David Holden; Martin D Rosenthal; Jaimar Rincon; Patrick T Verdugo; Shawn D Larson; Frederick A Moore; Scott C Brakenridge; Alicia M Mohr; Henry V Baker; Lyle L Moldawer; Philip A Efron
Journal:  Physiol Genomics       Date:  2015-11-17       Impact factor: 3.107

10.  Persistent inflammation, immunosuppression, and catabolism syndrome after severe blunt trauma.

Authors:  Erin L Vanzant; Cecilia M Lopez; Tezcan Ozrazgat-Baslanti; Ricardo Ungaro; Ruth Davis; Alex G Cuenca; Lori F Gentile; Dina C Nacionales; Angela L Cuenca; Azra Bihorac; Christiaan Leeuwenburgh; Jennifer Lanz; Henry V Baker; Bruce McKinley; Lyle L Moldawer; Frederick A Moore; Philip A Efron
Journal:  J Trauma Acute Care Surg       Date:  2014-01       Impact factor: 3.313

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.