Literature DB >> 19587059

The closest relatives of icosahedral viruses of thermophilic bacteria are among viruses and plasmids of the halophilic archaea.

Matti Jalasvuori1, Silja T Jaatinen, Simonas Laurinavicius, Elina Ahola-Iivarinen, Nisse Kalkkinen, Dennis H Bamford, Jaana K H Bamford.   

Abstract

We have sequenced the genome and identified the structural proteins and lipids of the novel membrane-containing, icosahedral virus P23-77 of Thermus thermophilus. P23-77 has an approximately 17-kb circular double-stranded DNA genome, which was annotated to contain 37 putative genes. Virions were subjected to dissociation analysis, and five protein species were shown to associate with the internal viral membrane, while three were constituents of the protein capsid. Analysis of the bacteriophage genome revealed it to be evolutionarily related to another Thermus phage (IN93), archaeal Halobacterium plasmid (pHH205), a genetic element integrated into Haloarcula genome (designated here as IHP for integrated Haloarcula provirus), and the Haloarcula virus SH1. These genetic elements share two major capsid proteins and a putative packaging ATPase. The ATPase is similar with the ATPases found in the PRD1-type viruses, thus providing an evolutionary link to these viruses and furthering our knowledge on the origin of viruses.

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Year:  2009        PMID: 19587059      PMCID: PMC2738223          DOI: 10.1128/JVI.00869-09

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  75 in total

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Authors:  Alan A Simpson; Narayanasamy Nandhagopal; James L Van Etten; Michael G Rossmann
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-11-27

2.  Intermediates in the assembly pathway of the double-stranded RNA virus phi6.

Authors:  S J Butcher; T Dokland; P M Ojala; D H Bamford; S D Fuller
Journal:  EMBO J       Date:  1997-07-16       Impact factor: 11.598

3.  The 1.2-megabase genome sequence of Mimivirus.

Authors:  Didier Raoult; Stéphane Audic; Catherine Robert; Chantal Abergel; Patricia Renesto; Hiroyuki Ogata; Bernard La Scola; Marie Suzan; Jean-Michel Claverie
Journal:  Science       Date:  2004-10-14       Impact factor: 47.728

4.  Structural co-evolution of viruses and cells in the primordial world.

Authors:  Matti Jalasvuori; Jaana K H Bamford
Journal:  Orig Life Evol Biosph       Date:  2008-01-29       Impact factor: 1.950

5.  Large-scale purification of membrane-containing bacteriophage PRD1 and its subviral particles.

Authors:  J K Bamford; D H Bamford
Journal:  Virology       Date:  1991-03       Impact factor: 3.616

6.  The atomic structure of the bluetongue virus core.

Authors:  J M Grimes; J N Burroughs; P Gouet; J M Diprose; R Malby; S Ziéntara; P P Mertens; D I Stuart
Journal:  Nature       Date:  1998-10-01       Impact factor: 49.962

7.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

8.  Phospholipid molecular species profiles of tectiviruses infecting Gram-negative and Gram-positive hosts.

Authors:  Simonas Laurinavicius; Reijo Käkelä; Pentti Somerharju; Dennis H Bamford
Journal:  Virology       Date:  2004-05-01       Impact factor: 3.616

9.  The crystal structure of a virus-like particle from the hyperthermophilic archaeon Pyrococcus furiosus provides insight into the evolution of viruses.

Authors:  Fusamichi Akita; Khoon Tee Chong; Hideaki Tanaka; Eiki Yamashita; Naoyuki Miyazaki; Yuichiro Nakaishi; Mamoru Suzuki; Kazunori Namba; Yasuko Ono; Tomitake Tsukihara; Atsushi Nakagawa
Journal:  J Mol Biol       Date:  2007-03-02       Impact factor: 5.469

10.  A novel thermophilic lysozyme from bacteriophage phiIN93.

Authors:  Isao Matsushita; Hideshi Yanase
Journal:  Biochem Biophys Res Commun       Date:  2008-10-01       Impact factor: 3.575

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  27 in total

1.  Genomic and proteomic characterization of the large Myoviridae bacteriophage ϕTMA of the extreme thermophile Thermus thermophilus.

Authors:  Masatada Tamakoshi; Aya Murakami; Motoki Sugisawa; Kenji Tsuneizumi; Shigeki Takeda; Toshihiko Saheki; Takashi Izumi; Toshihiko Akiba; Kaoru Mitsuoka; Hidehiro Toh; Atsushi Yamashita; Fumio Arisaka; Masahira Hattori; Tairo Oshima; Akihiko Yamagishi
Journal:  Bacteriophage       Date:  2011-05-01

2.  A unique group of virus-related, genome-integrating elements found solely in the bacterial family Thermaceae and the archaeal family Halobacteriaceae.

Authors:  Matti Jalasvuori; Alice Pawlowski; Jaana K H Bamford
Journal:  J Bacteriol       Date:  2010-04-16       Impact factor: 3.490

Review 3.  How hyperthermophiles adapt to change their lives: DNA exchange in extreme conditions.

Authors:  Marleen van Wolferen; Małgorzata Ajon; Arnold J M Driessen; Sonja-Verena Albers
Journal:  Extremophiles       Date:  2013-05-28       Impact factor: 2.395

4.  The Minor Capsid Protein VP11 of Thermophilic Bacteriophage P23-77 Facilitates Virus Assembly by Using Lipid-Protein Interactions.

Authors:  Alice Pawlowski; Anni M Moilanen; Ilona A Rissanen; Juha A E Määttä; Vesa P Hytönen; Janne A Ihalainen; Jaana K H Bamford
Journal:  J Virol       Date:  2015-05-13       Impact factor: 5.103

5.  Temporal regulation of gene expression of the Thermus thermophilus bacteriophage P23-45.

Authors:  Zhanna Berdygulova; Lars F Westblade; Laurence Florens; Eugene V Koonin; Brian T Chait; Erlan Ramanculov; Michael P Washburn; Seth A Darst; Konstantin Severinov; Leonid Minakhin
Journal:  J Mol Biol       Date:  2010-11-02       Impact factor: 5.469

Review 6.  Genomics of bacterial and archaeal viruses: dynamics within the prokaryotic virosphere.

Authors:  Mart Krupovic; David Prangishvili; Roger W Hendrix; Dennis H Bamford
Journal:  Microbiol Mol Biol Rev       Date:  2011-12       Impact factor: 11.056

7.  New, closely related haloarchaeal viral elements with different nucleic Acid types.

Authors:  Elina Roine; Petra Kukkaro; Lars Paulin; Simonas Laurinavicius; Ausra Domanska; Pentti Somerharju; Dennis H Bamford
Journal:  J Virol       Date:  2010-01-20       Impact factor: 5.103

8.  Identification, Characterization, and Application of the Replicon Region of the Halophilic Temperate Sphaerolipovirus SNJ1.

Authors:  Yuchen Wang; Linshan Sima; Jie Lv; Suiyuan Huang; Ying Liu; Jiao Wang; Mart Krupovic; Xiangdong Chen
Journal:  J Bacteriol       Date:  2016-06-27       Impact factor: 3.490

9.  Characterization of Helicobacter pylori bacteriophage KHP30.

Authors:  Jumpei Uchiyama; Hiroaki Takeuchi; Shin-ichiro Kato; Keiji Gamoh; Iyo Takemura-Uchiyama; Takako Ujihara; Masanori Daibata; Shigenobu Matsuzaki
Journal:  Appl Environ Microbiol       Date:  2013-03-08       Impact factor: 4.792

10.  Bipartite Network Analysis of the Archaeal Virosphere: Evolutionary Connections between Viruses and Capsidless Mobile Elements.

Authors:  Jaime Iranzo; Eugene V Koonin; David Prangishvili; Mart Krupovic
Journal:  J Virol       Date:  2016-11-28       Impact factor: 5.103

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