Literature DB >> 19586928

Admixture mapping of ankle-arm index: identification of a candidate locus associated with peripheral arterial disease.

M L Scherer1, M A Nalls, L Pawlikowska, E Ziv, G Mitchell, S Huntsman, D Hu, K Sutton-Tyrrell, E G Lakatta, W-C Hsueh, A B Newman, A Tandon, L Kim, P-Y Kwok, A Sung, R Li, B Psaty, A P Reiner, T Harris.   

Abstract

BACKGROUND: Peripheral arterial disease (PAD) is associated with significant morbidity and mortality, and has a higher prevalence in African Americans than Caucasians. Ankle-arm index (AAI) is the ratio of systolic blood pressure in the leg to that in the arm, and, when low, is a marker of PAD.
METHODS: The authors used an admixture mapping approach to search for genetic loci associated with low AAI. Using data from 1040 African American participants in the observational, population based Health, Aging, and Body Composition Study who were genotyped at 1322 single nucleotide polymorphisms (SNPs) that are informative for African versus European ancestry and span the entire genome, we estimated genetic ancestry in each chromosomal region and then tested the association between AAI and genetic ancestry at each locus.
RESULTS: The authors found a region of chromosome 11 that reaches its peak between 80 and 82 Mb associated with low AAI (p<0.001 for rs12289502 and rs9665943, both within this region). 753 African American participants in the observational, population based Cardiovascular Health Study were genotyped at rs9665943 to test the reproducibility of this association, and this association was also statistically significant (odds ratio (OR) for homozygous African genotype 1.59, 95% confidence interval (CI) 1.12 to 2.27). Another candidate SNP (rs1042602) in the same genomic region was tested in both populations, and was also found to be significantly associated with low AAI in both populations (OR for homozygous African genotype 1.89, 95% CI 1.29 to 2.76).
CONCLUSION: This study identifies a novel region of chromosome 11 representing an area with a potential candidate gene associated with PAD in African Americans.

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Year:  2009        PMID: 19586928      PMCID: PMC2805758          DOI: 10.1136/jmg.2008.064808

Source DB:  PubMed          Journal:  J Med Genet        ISSN: 0022-2593            Impact factor:   6.318


  40 in total

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2.  Population structure, admixture, and aging-related phenotypes in African American adults: the Cardiovascular Health Study.

Authors:  Alexander P Reiner; Elad Ziv; Denise L Lind; Caroline M Nievergelt; Nicholas J Schork; Steven R Cummings; Angie Phong; Esteban González Burchard; Tamara B Harris; Bruce M Psaty; Pui-Yan Kwok
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3.  Mapping genes underlying ethnic differences in disease risk by linkage disequilibrium in recently admixed populations.

Authors:  P M McKeigue
Journal:  Am J Hum Genet       Date:  1997-01       Impact factor: 11.025

4.  The Cardiovascular Health Study: design and rationale.

Authors:  L P Fried; N O Borhani; P Enright; C D Furberg; J M Gardin; R A Kronmal; L H Kuller; T A Manolio; M B Mittelmark; A Newman
Journal:  Ann Epidemiol       Date:  1991-02       Impact factor: 3.797

5.  Admixture as a tool for finding linked genes and detecting that difference from allelic association between loci.

Authors:  R Chakraborty; K M Weiss
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

6.  Direct evidence for a role of the "spot 14" protein in the regulation of lipid synthesis.

Authors:  W B Kinlaw; J L Church; J Harmon; C N Mariash
Journal:  J Biol Chem       Date:  1995-07-14       Impact factor: 5.157

7.  Ankle-arm index as a marker of atherosclerosis in the Cardiovascular Health Study. Cardiovascular Heart Study (CHS) Collaborative Research Group.

Authors:  A B Newman; D S Siscovick; T A Manolio; J Polak; L P Fried; N O Borhani; S K Wolfson
Journal:  Circulation       Date:  1993-09       Impact factor: 29.690

8.  Mapping by admixture linkage disequilibrium in human populations: limits and guidelines.

Authors:  J C Stephens; D Briscoe; S J O'Brien
Journal:  Am J Hum Genet       Date:  1994-10       Impact factor: 11.025

9.  Fibrinogen genotype and risk of peripheral atherosclerosis.

Authors:  F G Fowkes; J M Connor; F B Smith; J Wood; P T Donnan; G D Lowe
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10.  Morbidity and mortality in hypertensive adults with a low ankle/arm blood pressure index.

Authors:  A B Newman; K Sutton-Tyrrell; M T Vogt; L H Kuller
Journal:  JAMA       Date:  1993-07-28       Impact factor: 56.272

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  9 in total

1.  Mexican-American admixture mapping analyses for diabetic nephropathy in type 2 diabetes mellitus.

Authors:  Sharon Adler; Madeleine Pahl; Hanna Abboud; Susanne Nicholas; Eli Ipp; Michael Seldin
Journal:  Semin Nephrol       Date:  2010-03       Impact factor: 5.299

Review 2.  Admixture mapping comes of age.

Authors:  Cheryl A Winkler; George W Nelson; Michael W Smith
Journal:  Annu Rev Genomics Hum Genet       Date:  2010       Impact factor: 8.929

3.  Genetic ancestry is associated with measures of subclinical atherosclerosis in African Americans: the Jackson Heart Study.

Authors:  Samson Y Gebreab; Pia Riestra; Rumana J Khan; Ruihua Xu; Solomon K Musani; Fasil Tekola-Ayele; Adolfo Correa; James G Wilson; Charles N Rotimi; Sharon K Davis
Journal:  Arterioscler Thromb Vasc Biol       Date:  2015-03-05       Impact factor: 8.311

Review 4.  Peripheral Arterial Disease Genetics: Progress to Date and Challenges Ahead.

Authors:  Nathan Belkin; Scott M Damrauer
Journal:  Curr Cardiol Rep       Date:  2017-11-01       Impact factor: 2.931

Review 5.  Disparities in peripheral artery disease care: A review and call for action.

Authors:  Falen Demsas; Malachi M Joiner; Kate Telma; Alyssa M Flores; Semhar Teklu; Elsie Gyang Ross
Journal:  Semin Vasc Surg       Date:  2022-05-08       Impact factor: 1.222

6.  A genome-wide admixture scan for ancestry-linked genes predisposing to sarcoidosis in African-Americans.

Authors:  B A Rybicki; A M Levin; P McKeigue; I Datta; C Gray-McGuire; M Colombo; D Reich; R R Burke; M C Iannuzzi
Journal:  Genes Immun       Date:  2010-12-23       Impact factor: 2.676

7.  Development of admixture mapping panels for African Americans from commercial high-density SNP arrays.

Authors:  Guanjie Chen; Daniel Shriner; Jie Zhou; Ayo Doumatey; Hanxia Huang; Norman P Gerry; Alan Herbert; Michael F Christman; Yuanxiu Chen; Georgia M Dunston; Mezbah U Faruque; Charles N Rotimi; Adebowale Adeyemo
Journal:  BMC Genomics       Date:  2010-07-05       Impact factor: 3.969

8.  Evaluating genetic susceptibility to Staphylococcus aureus bacteremia in African Americans using admixture mapping.

Authors:  D D Cyr; A S Allen; G-J Du; F Ruffin; C Adams; J T Thaden; S A Maskarinec; M Souli; S Guo; D M Dykxhoorn; W K Scott; V G Fowler
Journal:  Genes Immun       Date:  2017-03-23       Impact factor: 2.676

9.  Generalized admixture mapping for complex traits.

Authors:  Bin Zhu; Allison E Ashley-Koch; David B Dunson
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  9 in total

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