Literature DB >> 19585982

Structural rearrangements in water viewed through two-dimensional infrared spectroscopy.

Sean T Roberts1, Krupa Ramasesha, Andrei Tokmakoff.   

Abstract

Compared with other molecular liquids, water is highly structured because of its ability to form up to four hydrogen bonds, resulting in a tetrahedral network of molecules. However, this underlying intermolecular structure is constantly in motion, exhibiting large fluctuations and reorganizations on time scales from femtoseconds to picoseconds. These motions allow water to play a key role in a number of chemical and biological processes. By exploiting the fact that the OH stretching frequency of dilute HOD in liquid D(2)O is highly dependent upon the configuration of the neighbor nearest to the proton, researchers have been able to track water's time-dependent structure using two-dimensional infrared (2D IR) spectroscopy, which tags molecules at an initial frequency and then watches as that frequency evolves with respect to time. Recent advances in molecular dynamics simulation techniques allow for the calculation of 2D IR spectra, providing an atomistic interpretation tool of 2D IR spectra in terms of the underlying dynamics of the liquid. In this Account, we review recent ultrafast 2D IR studies at MIT that provide new information on the mechanism of hydrogen-bond rearrangements in liquid water. The 2D IR spectra of the OH stretching vibration of HOD in D(2)O appear highly asymmetric. In the frequency range indicative of hydrogen-bonded molecules (<3300 cm(-1)), the 2D spectra remain fairly compact. By contrast, in the frequency range in which molecules having weak or broken hydrogen bonds absorb (>3500 cm(-1)), the 2D spectra broaden over a time scale of approximately 60 fs, consistent with librations (hindered rotations) of water molecules. This broadening indicates that molecules forming weak or broken hydrogen bonds are unstable and reorient rapidly to return to a hydrogen-bonded configuration. These conclusions are supported by the results of molecular dynamics simulations, which suggest that water molecules undergo a large-angle reorientation during the course of hydrogen-bond exchange. The transition state for hydrogen-bond rearrangements is found to resemble a bifurcated hydrogen bond. Roughly half of the hydrogen-bond exchange events in the simulation are found to involve the insertion of a water molecule across a hydrogen bond, suggesting that hydrogen-bond exchange in water involves the correlated motion of water molecules as far away as the second solvation shell. The combination of ultrafast 2D IR spectroscopy with simulation-based modeling is leading to self-consistent descriptions of the underlying dynamics in liquid water. Moreover, these results also demonstrate a more general, unique characteristic of the spectroscopy: if a spectral signature of the transition state exists, then 2D IR can effectively serve as a transition-state spectroscopy.

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Year:  2009        PMID: 19585982     DOI: 10.1021/ar900088g

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  17 in total

1.  Hydration and vibrational dynamics of betaine (N,N,N-trimethylglycine).

Authors:  Tanping Li; Yaowen Cui; John Mathaga; Revati Kumar; Daniel G Kuroda
Journal:  J Chem Phys       Date:  2015-06-07       Impact factor: 3.488

Review 2.  Applications of two-dimensional infrared spectroscopy.

Authors:  Amanda L Le Sueur; Rachel E Horness; Megan C Thielges
Journal:  Analyst       Date:  2015-07-07       Impact factor: 4.616

3.  Slow hydrogen-bond switching dynamics at the water surface revealed by theoretical two-dimensional sum-frequency spectroscopy.

Authors:  Yicun Ni; Scott M Gruenbaum; James L Skinner
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-17       Impact factor: 11.205

Review 4.  Watching Proteins Wiggle: Mapping Structures with Two-Dimensional Infrared Spectroscopy.

Authors:  Ayanjeet Ghosh; Joshua S Ostrander; Martin T Zanni
Journal:  Chem Rev       Date:  2017-01-06       Impact factor: 60.622

5.  Two-dimensional infrared spectroscopy measures the structural dynamics of a self-assembled film only one molecule thick.

Authors:  Martin T Zanni
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-19       Impact factor: 11.205

6.  Lowest energy electronic transition in aqueous Cl(-) salts: Cl(-) → (H2O)6 charge transfer transition.

Authors:  Kan Xiong; Sanford A Asher
Journal:  J Phys Chem A       Date:  2010-11-24       Impact factor: 2.781

7.  Spectral diffusion at the water/lipid interface revealed by two-dimensional fourth-order optical spectroscopy: a classical simulation study.

Authors:  Yuki Nagata; Shaul Mukamel
Journal:  J Am Chem Soc       Date:  2011-02-18       Impact factor: 15.419

8.  Shot-to-shot 2D IR spectroscopy at 100 kHz using a Yb laser and custom-designed electronics.

Authors:  Kieran M Farrell; Josh S Ostrander; Andrew C Jones; Baichhabi R Yakami; Sidney S Dicke; Chris T Middleton; Peter Hamm; Martin T Zanni
Journal:  Opt Express       Date:  2020-10-26       Impact factor: 3.894

9.  Two-dimensional x-ray correlation spectroscopy of remote core states.

Authors:  Daniel Healion; Yu Zhang; Jason D Biggs; Weijie Hua; Shaul Mukamel
Journal:  Struct Dyn       Date:  2013-12-18       Impact factor: 2.920

10.  Water dynamics in protein hydration shells: the molecular origins of the dynamical perturbation.

Authors:  Aoife C Fogarty; Damien Laage
Journal:  J Phys Chem B       Date:  2014-02-10       Impact factor: 2.991

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