Literature DB >> 19578151

Spirochaeta dissipatitropha sp. nov., an alkaliphilic, obligately anaerobic bacterium, and emended description of the genus Spirochaeta Ehrenberg 1835.

Elena V Pikuta1, Richard B Hoover, Asim K Bej, Damien Marsic, William B Whitman, Paul Krader.   

Abstract

A novel obligately anaerobic, mesophilic, alkaliphilic spirochaete, strain ASpC2(T), was isolated from an anaerobic sediment of alkaline, hypersaline Owens Lake in California, USA. The Gram-negative cells are motile, helical in shape and 0.23 x 8.0-18.0 mum. Growth occurs within the following ranges: 13-41 degrees C, with optimal growth at 35 degrees C; 1-3 % (w/v) NaCl, with optimal growth at 2 % (w/v) NaCl; and pH 7.8-10.5, with optimal growth at pH 10.0. The novel isolate is strictly alkaliphilic and requires high concentrations of carbonate ions in the medium. It utilizes some sugars, some organic acids, some amino acids, Casamino acids, yeast extract and peptone. The main end products of glucose fermentation are CO(2) and acetate. Strain ASpC2(T) is resistant to kanamycin and rifampicin, but sensitive to ampicillin, chloramphenicol, gentamicin and tetracycline. The DNA G+C content of the new isolate is 43.8 mol%, its genome size is 6 x 10(8) Da and the melting temperature of its genomic DNA is 71 degrees C. DNA-DNA hybridization experiments demonstrated 46 % similarity with the phylogenetically most closely related species, Spirochaeta asiatica Z-7591(T). On the basis of physiological and molecular properties, the new isolate belongs taxonomically to a novel species within the genus Spirochaeta, for which the name Spirochaeta dissipatitropha sp. nov. is proposed (type strain, ASpC2(T)=ATCC BAA-1083(T)=JCM 12856(T)). S. dissipatitropha ASpC2(T) is the second strain in the genus (after Spirochaeta smaragdinae SEBR 4228(T)) that is able to use proteolysis products as the sole energy source, and additional tests have shown that other halo-alkaliphilic spirochaetes (Spirochaeta americana, Spirochaeta alkalica and Spirochaeta africana) are also able to grow on yeast extract alone; therefore, an emended description for the genus Spirochaeta is given.

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Year:  2009        PMID: 19578151     DOI: 10.1099/ijs.0.65862-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  10 in total

Review 1.  Nature and bioprospecting of haloalkaliphilics: a review.

Authors:  Ganapathi Uma; Mariavincent Michael Babu; Vincent Samuel Gnana Prakash; Selvaraj Jeraldin Nisha; Thavasimuthu Citarasu
Journal:  World J Microbiol Biotechnol       Date:  2020-04-23       Impact factor: 3.312

2.  Proteinivorax tanatarense gen. nov., sp. nov., an anaerobic, haloalkaliphilic, proteolytic bacterium isolated from a decaying algal bloom, and proposal of Proteinivoraceae fam. nov.

Authors:  Vadim Kevbrin; Yulia Boltyanskaya; Tatjana Zhilina; Tatjana Kolganova; Elena Lavrentjeva; Boris Kuznetsov
Journal:  Extremophiles       Date:  2013-06-27       Impact factor: 2.395

3.  Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228).

Authors:  Konstantinos Mavromatis; Montri Yasawong; Olga Chertkov; Alla Lapidus; Susan Lucas; Matt Nolan; Tijana Glavina Del Rio; Hope Tice; Jan-Fang Cheng; Sam Pitluck; Konstantinos Liolios; Natalia Ivanova; Roxanne Tapia; Cliff Han; David Bruce; Lynne Goodwin; Amrita Pati; Ami Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; John C Detter; Manfred Rohde; Evelyne Brambilla; Stefan Spring; Markus Göker; Johannes Sikorski; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Hans-Peter Klenk; Nikos C Kyrpides
Journal:  Stand Genomic Sci       Date:  2010-10-18

4.  Biased gene transfer and its implications for the concept of lineage.

Authors:  Cheryl P Andam; J Peter Gogarten
Journal:  Biol Direct       Date:  2011-09-23       Impact factor: 4.540

5.  Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta.

Authors:  Birte Abt; Cliff Han; Carmen Scheuner; Megan Lu; Alla Lapidus; Matt Nolan; Susan Lucas; Nancy Hammon; Shweta Deshpande; Jan-Fang Cheng; Roxanne Tapia; Lynne A Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Marcel Huntemann; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Evelyne-Marie Brambilla; Manfred Rohde; Stefan Spring; Sabine Gronow; Markus Göker; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; John C Detter
Journal:  Stand Genomic Sci       Date:  2012-05-04

6.  Complete genome sequence and description of Salinispira pacifica gen. nov., sp. nov., a novel spirochaete isolated form a hypersaline microbial mat.

Authors:  Wajdi Ben Hania; Manon Joseph; Peter Schumann; Boyke Bunk; Anne Fiebig; Cathrin Spröer; Hans-Peter Klenk; Marie-Laure Fardeau; Stefan Spring
Journal:  Stand Genomic Sci       Date:  2015-02-09

7.  Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692(T)) from the alkaline Lake Magadi in the East African Rift.

Authors:  Konstantinos Liolos; Birte Abt; Carmen Scheuner; Hazuki Teshima; Brittany Held; Alla Lapidus; Matt Nolan; Susan Lucas; Shweta Deshpande; Jan-Fang Cheng; Roxanne Tapia; Lynne A Goodwin; Sam Pitluck; Ioanna Pagani; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Marcel Huntemann; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Manfred Rohde; Brian J Tindall; John C Detter; Markus Göker; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Tanja Woyke; Hans-Peter Klenk; Nikos C Kyrpides
Journal:  Stand Genomic Sci       Date:  2013-05-20

Review 8.  Ecology and application of haloalkaliphilic anaerobic microbial communities.

Authors:  João A B Sousa; Dimitry Y Sorokin; Martijn F M Bijmans; Caroline M Plugge; Alfons J M Stams
Journal:  Appl Microbiol Biotechnol       Date:  2015-09-10       Impact factor: 4.813

9.  Taxonomy and evolution of bacteriochlorophyll a-containing members of the OM60/NOR5 clade of marine gammaproteobacteria: description of Luminiphilus syltensis gen. nov., sp. nov., reclassification of Haliea rubra as Pseudohaliea rubra gen. nov., comb. nov., and emendation of Chromatocurvus halotolerans.

Authors:  Stefan Spring; Thomas Riedel; Cathrin Spröer; Shi Yan; Jens Harder; Bernhard M Fuchs
Journal:  BMC Microbiol       Date:  2013-05-24       Impact factor: 3.605

10.  Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1(T)), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov., Treponema stenostrepta comb. nov., and Treponema zuelzerae comb. nov., and emendation of the genus Treponema.

Authors:  Birte Abt; Markus Göker; Carmen Scheuner; Cliff Han; Megan Lu; Monica Misra; Alla Lapidus; Matt Nolan; Susan Lucas; Nancy Hammon; Shweta Deshpande; Jan-Fang Cheng; Roxanne Tapia; Lynne A Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Marcel Huntemann; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Cynthia D Jeffries; Manfred Rohde; Stefan Spring; Sabine Gronow; John C Detter; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Tanja Woyke; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2013-04-15
  10 in total

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