Literature DB >> 19571107

Transcriptional errors in human immunodeficiency virus type 1 generate targets for T-cell responses.

Keith E Garrison1, Stephane Champiat, Vanessa A York, Ashish T Agrawal, Esper G Kallas, Jeffrey N Martin, Frederick M Hecht, Steven G Deeks, Douglas F Nixon.   

Abstract

We measured T-cell responses to human immunodeficiency virus type 1 (HIV-1) cryptic epitopes encoded by regions of the viral genome not normally translated into viral proteins. T-cell responses to cryptic epitopes and to regions normally spliced out of the HIV-1 viral proteins Rev and Tat were detected in HIV-1-infected subjects.

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Year:  2009        PMID： 19571107      PMCID： PMC2745002          DOI： 10.1128/CVI.00410-08

Source DB:  PubMed          Journal:  Clin Vaccine Immunol        ISSN： 1556-679X


  11 in total

1.  ELISPOT cell rescue.

Authors:  Duncan A Meiklejohn; R Karl Karlsson; Annika C Karlsson; Joan M Chapman; Douglas F Nixon; Becky Schweighardt
Journal:  J Immunol Methods       Date:  2004-05       Impact factor: 2.303

2.  Cytolytic CD8+ T cells directed against a cryptic epitope derived from a retroviral alternative reading frame confer disease protection.

Authors:  On Ho; William R Green
Journal:  J Immunol       Date:  2006-02-15       Impact factor: 5.422

3.  Translation from cryptic reading frames of DNA vaccines generates an extended repertoire of immunogenic, MHC class I-restricted epitopes.

Authors:  Reinhold Schirmbeck; Petra Riedl; Nicolas Fissolo; Francois A Lemonnier; Antonio Bertoletti; Jörg Reimann
Journal:  J Immunol       Date:  2005-04-15       Impact factor: 5.422

4.  Ribosomal scanning past the primary initiation codon as a mechanism for expression of CTL epitopes encoded in alternative reading frames.

Authors:  T N Bullock; L C Eisenlohr
Journal:  J Exp Med       Date:  1996-10-01       Impact factor: 14.307

5.  Influence of combinations of human major histocompatibility complex genes on the course of HIV-1 infection.

Authors:  R A Kaslow; M Carrington; R Apple; L Park; A Muñoz; A J Saah; J J Goedert; C Winkler; S J O'Brien; C Rinaldo; R Detels; W Blattner; J Phair; H Erlich; D L Mann
Journal:  Nat Med       Date:  1996-04       Impact factor: 53.440

6.  The tat/rev intron of human immunodeficiency virus type 1 is inefficiently spliced because of suboptimal signals in the 3' splice site.

Authors:  A Staffa; A Cochrane
Journal:  J Virol       Date:  1994-05       Impact factor: 5.103

7.  The strength of the HIV-1 3' splice sites affects Rev function.

Authors:  Susanne Kammler; Marianne Otte; Ilona Hauber; Jørgen Kjems; Joachim Hauber; Heiner Schaal
Journal:  Retrovirology       Date:  2006-12-04       Impact factor: 4.602

8.  Immunoproteasome assembly: cooperative incorporation of interferon gamma (IFN-gamma)-inducible subunits.

Authors:  T A Griffin; D Nandi; M Cruz; H J Fehling; L V Kaer; J J Monaco; R A Colbert
Journal:  J Exp Med       Date:  1998-01-05       Impact factor: 14.307

9.  Identification of cryptic MHC I-restricted epitopes encoded by HIV-1 alternative reading frames.

Authors:  Sylvain Cardinaud; Arnaud Moris; Michèle Février; Pierre-Simon Rohrlich; Laurence Weiss; Pierre Langlade-Demoyen; François A Lemonnier; Olivier Schwartz; André Habel
Journal:  J Exp Med       Date:  2004-04-12       Impact factor: 14.307

10.  AIDS virus specific CD8+ T lymphocytes against an immunodominant cryptic epitope select for viral escape.

Authors:  Nicholas J Maness; Laura E Valentine; Gemma E May; Jason Reed; Shari M Piaskowski; Taeko Soma; Jessica Furlott; Eva G Rakasz; Thomas C Friedrich; David A Price; Emma Gostick; Austin L Hughes; John Sidney; Alessandro Sette; Nancy A Wilson; David I Watkins
Journal:  J Exp Med       Date:  2007-10-22       Impact factor: 14.307
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  13 in total

1.  Design and Antigenic Epitopes Prediction of a New Trial Recombinant Multiepitopic Rotaviral Vaccine: In Silico Analyses.

Authors:  Sima Jafarpour; Hoda Ayat; Ali Mohammad Ahadi
Journal:  Viral Immunol       Date:  2015-05-12       Impact factor: 2.257

2.  CD8+ T cell recognition of cryptic epitopes is a ubiquitous feature of AIDS virus infection.

Authors:  Nicholas J Maness; Andrew D Walsh; Shari M Piaskowski; Jessica Furlott; Holly L Kolar; Alexander T Bean; Nancy A Wilson; David I Watkins
Journal:  J Virol       Date:  2010-08-25       Impact factor: 5.103

3.  Presentation of Cryptic Peptides by MHC Class I Is Enhanced by Inflammatory Stimuli.

Authors:  Sharanya Prasad; Shelley R Starck; Nilabh Shastri
Journal:  J Immunol       Date:  2016-09-19       Impact factor: 5.422

4.  Antisense-Derived HIV-1 Cryptic Epitopes Are Not Major Drivers of Viral Evolution during the Acute Phase of Infection.

Authors:  Binghao J Peng; Jonathan M Carlson; Michael K P Liu; Feng Gao; Nilu Goonetilleke; Andrew J McMichael; Persephone Borrow; Jill Gilmour; Sonya L Heath; Eric Hunter; Anju Bansal; Paul A Goepfert
Journal:  J Virol       Date:  2018-09-12       Impact factor: 5.103

5.  Enhanced Recognition of HIV-1 Cryptic Epitopes Restricted by HLA Class I Alleles Associated With a Favorable Clinical Outcome.

Authors:  Anju Bansal; Tiffanie Mann; Sarah Sterrett; Binghao J Peng; Anne Bet; Jonathan M Carlson; Paul A Goepfert
Journal:  J Acquir Immune Defic Syndr       Date:  2015-09-01       Impact factor: 3.731

6.  Viral infection causes a shift in the self peptide repertoire presented by human MHC class I molecules.

Authors:  Charles T Spencer; Jelena S Bezbradica; Mireya G Ramos; Chenoa D Arico; Stephanie B Conant; Pavlo Gilchuk; Jennifer J Gray; Mu Zheng; Xinnan Niu; William Hildebrand; Andrew J Link; Sebastian Joyce
Journal:  Proteomics Clin Appl       Date:  2015-12       Impact factor: 3.494

Review 7.  Nowhere to hide: unconventional translation yields cryptic peptides for immune surveillance.

Authors:  Shelley R Starck; Nilabh Shastri
Journal:  Immunol Rev       Date:  2016-07       Impact factor: 12.988

Review 8.  Non-conventional sources of peptides presented by MHC class I.

Authors:  Shelley R Starck; Nilabh Shastri
Journal:  Cell Mol Life Sci       Date:  2011-03-10       Impact factor: 9.261

9.  CD8 T cell response and evolutionary pressure to HIV-1 cryptic epitopes derived from antisense transcription.

Authors:  Anju Bansal; Jonathan Carlson; Jiyu Yan; Olusimidele T Akinsiku; Malinda Schaefer; Steffanie Sabbaj; Anne Bet; David N Levy; Sonya Heath; Jianming Tang; Richard A Kaslow; Bruce D Walker; Thumbi Ndung'u; Philip J Goulder; David Heckerman; Eric Hunter; Paul A Goepfert
Journal:  J Exp Med       Date:  2010-01-11       Impact factor: 14.307

10.  Acute phase CD8+ T lymphocytes against alternate reading frame epitopes select for rapid viral escape during SIV infection.

Authors:  Andrew D Walsh; Benjamin N Bimber; Arpita Das; Shari M Piaskowski; Eva G Rakasz; Alexander T Bean; Philip A Mudd; Adam J Ericsen; Nancy A Wilson; Austin L Hughes; David H O'Connor; Nicholas J Maness
Journal:  PLoS One       Date:  2013-05-06       Impact factor: 3.240
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