Literature DB >> 19570907

Budding yeast SSD1-V regulates transcript levels of many longevity genes and extends chronological life span in purified quiescent cells.

Lihong Li1, Yong Lu, Li-Xuan Qin, Ziv Bar-Joseph, Margaret Werner-Washburne, Linda L Breeden.   

Abstract

Ssd1 is an RNA-binding protein that affects literally hundreds of different processes and is polymorphic in both wild and lab yeast strains. We have used transcript microarrays to compare mRNA levels in an isogenic pair of mutant (ssd1-d) and wild-type (SSD1-V) cells across the cell cycle. We find that 15% of transcripts are differentially expressed, but there is no correlation with those mRNAs bound by Ssd1. About 20% of cell cycle regulated transcripts are affected, and most show sharper amplitudes of oscillation in SSD1-V cells. Many transcripts whose gene products influence longevity are also affected, the largest class of which is involved in translation. Ribosomal protein mRNAs are globally down-regulated by SSD1-V. SSD1-V has been shown to increase replicative life span currency and we show that SSD1-V also dramatically increases chronological life span (CLS). Using a new assay of CLS in pure populations of quiescent prototrophs, we find that the CLS for SSD1-V cells is twice that of ssd1-d cells.

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Year:  2009        PMID: 19570907      PMCID: PMC2735484          DOI: 10.1091/mbc.e09-04-0347

Source DB:  PubMed          Journal:  Mol Biol Cell        ISSN: 1059-1524            Impact factor:   4.138


  103 in total

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Authors:  Jason Ptacek; Geeta Devgan; Gregory Michaud; Heng Zhu; Xiaowei Zhu; Joseph Fasolo; Hong Guo; Ghil Jona; Ashton Breitkreutz; Richelle Sopko; Rhonda R McCartney; Martin C Schmidt; Najma Rachidi; Soo-Jung Lee; Angie S Mah; Lihao Meng; Michael J R Stark; David F Stern; Claudio De Virgilio; Mike Tyers; Brenda Andrews; Mark Gerstein; Barry Schweitzer; Paul F Predki; Michael Snyder
Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

3.  PUF proteins bind Pop2p to regulate messenger RNAs.

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Journal:  Nat Struct Mol Biol       Date:  2006-05-21       Impact factor: 15.369

4.  Extension of chronological life span in yeast by decreased TOR pathway signaling.

Authors:  R Wilson Powers; Matt Kaeberlein; Seth D Caldwell; Brian K Kennedy; Stanley Fields
Journal:  Genes Dev       Date:  2006-01-15       Impact factor: 11.361

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Authors:  B Li; J R Warner
Journal:  J Biol Chem       Date:  1996-07-12       Impact factor: 5.157

6.  Mutation in the silencing gene SIR4 can delay aging in S. cerevisiae.

Authors:  B K Kennedy; N R Austriaco; J Zhang; L Guarente
Journal:  Cell       Date:  1995-02-10       Impact factor: 41.582

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Authors:  Hong Qin; Meng Lu
Journal:  Exp Gerontol       Date:  2006-03-03       Impact factor: 4.032

8.  A new yeast gene, HTR1, required for growth at high temperature, is needed for recovery from mating pheromone-induced G1 arrest.

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9.  AFT1: a mediator of iron regulated transcriptional control in Saccharomyces cerevisiae.

Authors:  Y Yamaguchi-Iwai; A Dancis; R D Klausner
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  26 in total

1.  PAS kinase promotes cell survival and growth through activation of Rho1.

Authors:  Caleb M Cardon; Thomas Beck; Michael N Hall; Jared Rutter
Journal:  Sci Signal       Date:  2012-01-31       Impact factor: 8.192

2.  The NDR Kinase Cbk1 Downregulates the Transcriptional Repressor Nrg1 through the mRNA-Binding Protein Ssd1 in Candida albicans.

Authors:  Hye-Jeong Lee; Jong-Myeong Kim; Woo Kyu Kang; Heebum Yang; Jeong-Yoon Kim
Journal:  Eukaryot Cell       Date:  2015-05-22

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Review 5.  Mitotic exit and separation of mother and daughter cells.

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6.  Global Promoter Targeting of a Conserved Lysine Deacetylase for Transcriptional Shutoff during Quiescence Entry.

Authors:  Jeffrey N McKnight; Joseph W Boerma; Linda L Breeden; Toshio Tsukiyama
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Review 7.  A common strategy for initiating the transition from proliferation to quiescence.

Authors:  Shawna Miles; Linda Breeden
Journal:  Curr Genet       Date:  2016-08-20       Impact factor: 3.886

8.  The proteomics of quiescent and nonquiescent cell differentiation in yeast stationary-phase cultures.

Authors:  George S Davidson; Ray M Joe; Sushmita Roy; Osorio Meirelles; Chris P Allen; Melissa R Wilson; Phillip H Tapia; Elaine E Manzanilla; Anne E Dodson; Swagata Chakraborty; Mark Carter; Susan Young; Bruce Edwards; Larry Sklar; Margaret Werner-Washburne
Journal:  Mol Biol Cell       Date:  2011-02-02       Impact factor: 4.138

Review 9.  Yeast colonies: a model for studies of aging, environmental adaptation, and longevity.

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10.  A prototrophic deletion mutant collection for yeast metabolomics and systems biology.

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