Literature DB >> 19558799

HP0902 from Helicobacter pylori is a thermostable, dimeric protein belonging to an all-beta topology of the cupin superfamily.

Dae-Won Sim1, Yoo-Sup Lee, Ji-Hun Kim, Min-Duk Seo, Bong-Jin Lee, Hyung-Sik Won.   

Abstract

Here, we report the first biochemical and structural characterization of the hypothetical protein HP0902 from Helicobacter pylori, in terms of structural genomics. Gel-permeation chromatography and dynamic light scattering indicated that the protein behaves as a dimer in solution. Circular dichroism spectroscopy showed that HP0902 primarily adopts a beta-structure and the protein was highly thermostable with a denaturing temperature higher than 70 degrees C. Finally, the backbone NMR assignments were obtained on the [(13)C,(15)N]HP0902 and the secondary structure was determined using the chemical shift data. Additionally, the local flexibility was assessed via a heteronuclear (1)H-(15)N steady state NOE experiment. The results revealed that HP0902 would adopt a compactly folded, all-beta topology with 11 beta-strands. All of the results clearly support the notion that HP0902 belongs to the cupin superfamily of proteins.

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Year:  2009        PMID: 19558799     DOI: 10.5483/bmbrep.2009.42.6.387

Source DB:  PubMed          Journal:  BMB Rep        ISSN: 1976-6696            Impact factor:   4.778


  2 in total

1.  Crystallization and X-ray data collection of HP0902 from Helicobacter pylori 26695.

Authors:  Dae Won Sim; Jung Hyun Song; Woo Cheol Lee; Yoo Sup Lee; Hye Yeon Kim; Hyung Sik Won
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-26

2.  Ab initio structural modeling of and experimental validation for Chlamydia trachomatis protein CT296 reveal structural similarity to Fe(II) 2-oxoglutarate-dependent enzymes.

Authors:  Kyle E Kemege; John M Hickey; Scott Lovell; Kevin P Battaile; Yang Zhang; P Scott Hefty
Journal:  J Bacteriol       Date:  2011-09-30       Impact factor: 3.490

  2 in total

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