Literature DB >> 19556709

Comprehensive phylogeny of the family Sparidae (Perciformes: Teleostei) inferred from mitochondrial gene analyses.

Satoru N Chiba1, Yukio Iwatsuki, Tetsuo Yoshino, Naoto Hanzawa.   

Abstract

Sparid fishes consist of approximately 115 species in 33 genera that are broadly distributed in tropical and temperate coastal waters. Although several phylogenetic analyses were conducted based on specific molecular markers, their classification remains unresolved. Here, we present the most comprehensive molecular phylogeny of the family Sparidae to date, based on cytochrome b (cyt-b) genes. We determined 18 sequences of sparids and conducted phylogenetic analyses among 72 individuals representing 66 sparids with 23 outgroup species. Phylogenetic trees were constructed according to partitioned Maximum Likelihood (ML) and Bayesian methods. The phylogenetic analyses were conducted on two different data sets (including all positions; RY-coding). The phylogenetic trees showed monophyly of the family Sparidae with a different taxon, centracanthid Spicara. The subfamilies in the Sparidae in all trees are non-monophyletic and do not agree with current classification of the subfamilies. The genera Acanthopagrus, Cheimerius, Dentex, Diplodus, Pagellus, Pagrus, and Spicara are also non-monophyletic and their classifications should be revised based on the phylogenetic relationships and reinvestigation of morphological characters. The sparids are divided into three major clades, A, B and C, respectively in the ML tree based on all codon positions, whereas clade C was paraphyletic in the other trees. The species in clade C are known to be present in the eastern Pacific to western Atlantic, whereas those in clades A and B are distributed in various oceanic regions. Some sub-clades in clades A and B consist of species that are distributed in defined local regions. We further investigated evolutionary patterns of 87 morphological characters by ancestral character-state reconstruction according to the parsimony criteria. The results suggested high evolutionary plasticity of the characters in sparids, indicating that it causes species-diversity and taxonomic confusion at various taxonomic levels, and that such convergent evolution may occur more frequently also in other coastal fishes.

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Year:  2009        PMID: 19556709     DOI: 10.1266/ggs.84.153

Source DB:  PubMed          Journal:  Genes Genet Syst        ISSN: 1341-7568            Impact factor:   1.517


  10 in total

1.  The 5S rDNA high dynamism in Diplodus sargus is a transposon-mediated mechanism. Comparison with other multigene families and Sparidae species.

Authors:  Manuel A Merlo; Ismael Cross; Manuel Manchado; Salvador Cárdenas; Laureana Rebordinos
Journal:  J Mol Evol       Date:  2013-01-26       Impact factor: 2.395

2.  Lamellodiscus aff. euzeti Diamanka, Boudaya, Toguebaye & Pariselle, 2011 (Monogenea: Diplectanidae) from the gills of Cheimerius nufar (Valenciennes) (Pisces: Sparidae) collected in the Arabian Sea, with comments on the distribution, specificity and historical biogeography of Lamellodiscus spp.

Authors:  Volodymyr K Machkewskyi; Evgenija V Dmitrieva; David I Gibson; Sara Al-Jufaili
Journal:  Syst Parasitol       Date:  2014-10-10       Impact factor: 1.431

3.  A phylogenetic perspective on the evolution of Mediterranean teleost fishes.

Authors:  Christine N Meynard; David Mouillot; Nicolas Mouquet; Emmanuel J P Douzery
Journal:  PLoS One       Date:  2012-05-08       Impact factor: 3.240

4.  Lamellodiscus euzeti n. sp. (Monogenea:Diplectanidae), a parasite from Dentex canariensis and D. gibbosus (Teleostei:Sparidae) in the Atlantic Ocean and Mediterranean Sea.

Authors:  A Diamanka; L Boudaya; B S Toguebaye; A Pariselle
Journal:  Parasite       Date:  2011-05       Impact factor: 3.000

5.  Repeated evolution of durophagy during ichthyosaur radiation after mass extinction indicated by hidden dentition.

Authors:  Jian-Dong Huang; Ryosuke Motani; Da-Yong Jiang; Xin-Xin Ren; Andrea Tintori; Olivier Rieppel; Min Zhou; Yuan-Chao Hu; Rong Zhang
Journal:  Sci Rep       Date:  2020-05-08       Impact factor: 4.379

6.  A phylogenetic comparative analysis on the evolution of sequential hermaphroditism in seabreams (Teleostei: Sparidae).

Authors:  Susanna Pla; Chiara Benvenuto; Isabella Capellini; Francesc Piferrer
Journal:  Sci Rep       Date:  2020-02-27       Impact factor: 4.379

7.  Phylogenomics investigation of sparids (Teleostei: Spariformes) using high-quality proteomes highlights the importance of taxon sampling.

Authors:  Paschalis Natsidis; Alexandros Tsakogiannis; Pavlos Pavlidis; Costas S Tsigenopoulos; Tereza Manousaki
Journal:  Commun Biol       Date:  2019-11-01

8.  Diversity and structure of sparids external microbiota (Teleostei) and its link with monogenean ectoparasites.

Authors:  Mathilde Scheifler; Sophie Sanchez-Brosseau; Elodie Magnanou; Yves Desdevises
Journal:  Anim Microbiome       Date:  2022-04-13

9.  Estimating the rate of irreversibility in protein evolution.

Authors:  Onuralp Soylemez; Fyodor A Kondrashov
Journal:  Genome Biol Evol       Date:  2012       Impact factor: 3.416

10.  Dentex dentex Frauds: Establishment of a New DNA Barcoding Marker.

Authors:  Marina Ceruso; Celestina Mascolo; Pasquale De Luca; Iolanda Venuti; Elio Biffali; Rosa Luisa Ambrosio; Giorgio Smaldone; Paolo Sordino; Tiziana Pepe
Journal:  Foods       Date:  2021-03-10
  10 in total

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