Literature DB >> 19554563

Toward safe genetically modified organisms through the chemical diversification of nucleic acids.

Piet Herdewijn1, Philippe Marlière.   

Abstract

It is argued that genetic proliferation should be rationally extended so as to enable the propagation in vivo of additional types of nucleic acids (XNA for 'xeno-nucleic acids'), whose chemical backbone motifs would differ from deoxyribose and ribose, and whose polymerization would not interfere with DNA and RNA biosynthesis. Because XNA building blocks do not occur in nature, they would have to be synthesized and supplied to cells which would be equipped with an appropriate enzymatic machinery for polymerizing them. The invasion of plants and animals with XNA replicons can be envisioned in the long run, but it is in microorganisms, and more specifically in bacteria, that the feasibility of such chemical systems and the establishment of genetic enclaves separated from DNA and RNA is more likely to take place. The introduction of expanded coding through additional or alternative pairing will be facilitated by the propagation of replicons based on alternative backbone motifs and leaving groups, as enabled by XNA polymerases purposefully evolved to this end.

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Year:  2009        PMID: 19554563     DOI: 10.1002/cbdv.200900083

Source DB:  PubMed          Journal:  Chem Biodivers        ISSN: 1612-1872            Impact factor:   2.408


  32 in total

1.  Highly stable hexitol based XNA aptamers targeting the vascular endothelial growth factor.

Authors:  Elena Eremeeva; Antonios Fikatas; Lia Margamuljana; Mikhail Abramov; Dominique Schols; Elisabetta Groaz; Piet Herdewijn
Journal:  Nucleic Acids Res       Date:  2019-06-04       Impact factor: 16.971

Review 2.  Non-natural nucleic acids for synthetic biology.

Authors:  Daniel H Appella
Journal:  Curr Opin Chem Biol       Date:  2009-10-29       Impact factor: 8.822

3.  Direct observation of two cyclohexenyl (CeNA) ring conformations in duplex DNA.

Authors:  Koen Robeyns; Piet Herdewijn; Luc Van Meervelt
Journal:  Artif DNA PNA XNA       Date:  2010-07

Review 4.  Beyond DNA and RNA: The Expanding Toolbox of Synthetic Genetics.

Authors:  Alexander I Taylor; Gillian Houlihan; Philipp Holliger
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-06-03       Impact factor: 10.005

5.  Comparison between the orthorhombic and tetragonal forms of the heptamer sequence d[GCG(xT)GCG]/d(CGCACGC).

Authors:  Koen Robeyns; Piet Herdewijn; Luc Van Meervelt
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-08-26

Review 6.  Biology by design: from top to bottom and back.

Authors:  Brian R Fritz; Laura E Timmerman; Nichole M Daringer; Joshua N Leonard; Michael C Jewett
Journal:  J Biomed Biotechnol       Date:  2010-11-02

7.  A priority paper for the societal and ethical aspects of synthetic biology.

Authors:  Markus Schmidt; Agomoni Ganguli-Mitra; Helge Torgersen; Alexander Kelle; Anna Deplazes; Nikola Biller-Andorno
Journal:  Syst Synth Biol       Date:  2009-10-10

8.  The farther, the safer: a manifesto for securely navigating synthetic species away from the old living world.

Authors:  Philippe Marliere
Journal:  Syst Synth Biol       Date:  2009-10-10

9.  Iminodiacetic-phosphoramidates as metabolic prototypes for diversifying nucleic acid polymerization in vivo.

Authors:  Anne Giraut; Xiao-ping Song; Matheus Froeyen; Philippe Marlière; Piet Herdewijn
Journal:  Nucleic Acids Res       Date:  2010-01-22       Impact factor: 16.971

10.  Directed evolution of artificial enzymes (XNAzymes) from diverse repertoires of synthetic genetic polymers.

Authors:  Alexander I Taylor; Philipp Holliger
Journal:  Nat Protoc       Date:  2015-09-24       Impact factor: 13.491

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