Literature DB >> 19551165

2D-IR spectroscopy: ultrafast insights into biomolecule structure and function.

Neil T Hunt1.   

Abstract

Ultrafast 2D-IR spectroscopy is rapidly becoming a valuable tool for examining the relationship between structure and function of biomolecules. The unique combination of molecular-level structural information and ultrafast time resolution gives previously inaccessible insights relating to the rapid structural fluctuations, vibrational dynamics and solvent-solute interactions of proteins, all of which have important implications for the biological function of these species. In this tutorial review, the method and development of ultrafast 2D-IR spectroscopy is discussed, including an introduction to the two main experimental approaches, double resonance and photon echo 2D-IR, and the extension of the technique to non-equilibrium or transient 2D-IR measurements. The scope of the new information available through 2D-IR spectroscopy is then demonstrated by reference to the current state of the art of 2D-IR studies of molecules of biological interest.

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Year:  2009        PMID: 19551165     DOI: 10.1039/b819181f

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  19 in total

1.  Adding a dimension to the infrared spectra of interfaces using heterodyne detected 2D sum-frequency generation (HD 2D SFG) spectroscopy.

Authors:  Wei Xiong; Jennifer E Laaser; Randy D Mehlenbacher; Martin T Zanni
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

2.  Ultrafast chemical physics: In search of molecular movies.

Authors:  Julia A Weinstein; Neil T Hunt
Journal:  Nat Chem       Date:  2012-02-21       Impact factor: 24.427

3.  Transparent window 2D IR spectroscopy of proteins.

Authors:  Megan C Thielges
Journal:  J Chem Phys       Date:  2021-07-28       Impact factor: 3.488

4.  Azidohomoalanine: a conformationally sensitive IR probe of protein folding, protein structure, and electrostatics.

Authors:  Humeyra Taskent-Sezgin; Juah Chung; Partha S Banerjee; Sureshbabu Nagarajan; R Brian Dyer; Isaac Carrico; Daniel P Raleigh
Journal:  Angew Chem Int Ed Engl       Date:  2010-10-04       Impact factor: 15.336

5.  3-picolyl azide adenine dinucleotide as a probe of femtosecond to picosecond enzyme dynamics.

Authors:  Samrat Dutta; Yun-Liang Li; William Rock; Jon C D Houtman; Amnon Kohen; Christopher M Cheatum
Journal:  J Phys Chem B       Date:  2011-12-15       Impact factor: 2.991

6.  Characterization of azido-NAD+ to assess its potential as a two-dimensional infrared probe of enzyme dynamics.

Authors:  Samrat Dutta; Richard J Cook; Jon C D Houtman; Amnon Kohen; Christopher M Cheatum
Journal:  Anal Biochem       Date:  2010-08-10       Impact factor: 3.365

7.  Shot-to-shot 2D IR spectroscopy at 100 kHz using a Yb laser and custom-designed electronics.

Authors:  Kieran M Farrell; Josh S Ostrander; Andrew C Jones; Baichhabi R Yakami; Sidney S Dicke; Chris T Middleton; Peter Hamm; Martin T Zanni
Journal:  Opt Express       Date:  2020-10-26       Impact factor: 3.894

8.  Measuring thermodynamic preferences to form non-native conformations in nucleic acids using ultraviolet melting.

Authors:  Atul Rangadurai; Honglue Shi; Yu Xu; Bei Liu; Hala Abou Assi; John D Boom; Huiqing Zhou; Isaac J Kimsey; Hashim M Al-Hashimi
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-07       Impact factor: 12.779

9.  Protein Dynamics by Two-Dimensional Infrared Spectroscopy.

Authors:  Goran W Tumbic; Md Yeathad Hossan; Megan C Thielges
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2021-07-27       Impact factor: 12.400

10.  Grand challenges in analytical chemistry: towards more bright eyes for scientific research, social events and human health.

Authors:  Huangxian Ju
Journal:  Front Chem       Date:  2013-03-26       Impact factor: 5.221

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