Literature DB >> 19543231

Linear polyubiquitination: a new regulator of NF-kappaB activation.

Kazuhiro Iwai1, Fuminori Tokunaga.   

Abstract

The ubiquitin-conjugation system regulates a vast range of biological phenomena by affecting protein function mostly through polyubiquitin conjugation. The type of polyubiquitin chain that is generated seems to determine how conjugated proteins are regulated, as they are recognized specifically by proteins that contain chain-specific ubiquitin-binding motifs. An enzyme complex that catalyses the formation of newly described linear polyubiquitin chains--known as linear ubiquitin chain-assembly complex (LUBAC)--has recently been characterized, as has a particular ubiquitin-binding domain that specifically recognizes linear chains. Both have been shown to have crucial roles in the canonical nuclear factor-kappaB (NF-kappaB)-activation pathway. The ubiquitin system is intimately involved in regulating the NF-kappaB pathway, and the regulatory roles of K63-linked chains have been studied extensively. However, the role of linear chains in this process is only now emerging. This article discusses the possible mechanisms underlying linear polyubiquitin-mediated activation of NF-kappaB, and the different roles that K63-linked and linear chains have in NF-kappaB activation. Future directions for linear polyubiquitin research are also discussed.

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Year:  2009        PMID: 19543231      PMCID: PMC2727427          DOI: 10.1038/embor.2009.144

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  53 in total

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Authors:  Masahiro Yamamoto; Shintaro Sato; Tatsuya Saitoh; Hiroaki Sakurai; Satoshi Uematsu; Taro Kawai; Ken J Ishii; Osamu Takeuchi; Shizuo Akira
Journal:  J Immunol       Date:  2006-12-01       Impact factor: 5.422

2.  Finding NEMO by K63-linked polyubiquitin chain.

Authors:  F Chen; D Bhatia; Q Chang; V Castranova
Journal:  Cell Death Differ       Date:  2006-07-21       Impact factor: 15.828

Review 3.  Modification of proteins by ubiquitin and ubiquitin-like proteins.

Authors:  Oliver Kerscher; Rachael Felberbaum; Mark Hochstrasser
Journal:  Annu Rev Cell Dev Biol       Date:  2006       Impact factor: 13.827

4.  A ubiquitin ligase complex assembles linear polyubiquitin chains.

Authors:  Takayoshi Kirisako; Kiyoko Kamei; Shigeo Murata; Michiko Kato; Hiromi Fukumoto; Masato Kanie; Soichi Sano; Fuminori Tokunaga; Keiji Tanaka; Kazuhiro Iwai
Journal:  EMBO J       Date:  2006-09-28       Impact factor: 11.598

5.  Structural mechanisms underlying posttranslational modification by ubiquitin-like proteins.

Authors:  Billy T Dye; Brenda A Schulman
Journal:  Annu Rev Biophys Biomol Struct       Date:  2007

Review 6.  Regulation and function of IKK and IKK-related kinases.

Authors:  Hans Häcker; Michael Karin
Journal:  Sci STKE       Date:  2006-10-17

7.  Mutual regulation of conventional protein kinase C and a ubiquitin ligase complex.

Authors:  Munehiro Nakamura; Fuminori Tokunaga; Shin-ichi Sakata; Kazuhiro Iwai
Journal:  Biochem Biophys Res Commun       Date:  2006-10-27       Impact factor: 3.575

8.  Sensing of Lys 63-linked polyubiquitination by NEMO is a key event in NF-kappaB activation [corrected].

Authors:  Chuan-Jin Wu; Dietrich B Conze; Tao Li; Srinivasa M Srinivasula; Jonathan D Ashwell
Journal:  Nat Cell Biol       Date:  2006-03-19       Impact factor: 28.824

9.  RBCK1 negatively regulates tumor necrosis factor- and interleukin-1-triggered NF-kappaB activation by targeting TAB2/3 for degradation.

Authors:  Yang Tian; Yan Zhang; Bo Zhong; Yan-Yi Wang; Fei-Ci Diao; Rui-Peng Wang; Min Zhang; Dan-Ying Chen; Zhong-He Zhai; Hong-Bing Shu
Journal:  J Biol Chem       Date:  2007-04-20       Impact factor: 5.157

10.  Activation of IKK by TNFalpha requires site-specific ubiquitination of RIP1 and polyubiquitin binding by NEMO.

Authors:  Chee-Kwee Ea; Li Deng; Zong-Ping Xia; Gabriel Pineda; Zhijian J Chen
Journal:  Mol Cell       Date:  2006-04-06       Impact factor: 17.970

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  106 in total

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Authors:  Chan Hyun Na; Junmin Peng
Journal:  Methods Mol Biol       Date:  2012

2.  Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex.

Authors:  Yusuke Sato; Hiroaki Fujita; Azusa Yoshikawa; Masami Yamashita; Atsushi Yamagata; Stephen E Kaiser; Kazuhiro Iwai; Shuya Fukai
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-02       Impact factor: 11.205

Review 3.  Twists and turns in ubiquitin-like protein conjugation cascades.

Authors:  Brenda A Schulman
Journal:  Protein Sci       Date:  2011-11-09       Impact factor: 6.725

Review 4.  The expanding universe of ubiquitin and ubiquitin-like modifiers.

Authors:  Richard D Vierstra
Journal:  Plant Physiol       Date:  2012-06-12       Impact factor: 8.340

Review 5.  The various roles of ubiquitin in Wnt pathway regulation.

Authors:  Daniele V F Tauriello; Madelon M Maurice
Journal:  Cell Cycle       Date:  2010-09-25       Impact factor: 4.534

6.  TRAF2 exerts opposing effects on basal and TNFα-induced activation of the classic IKK complex in hematopoietic cells in mice.

Authors:  Laiqun Zhang; Ken Blackwell; Lauren M Workman; Katherine N Gibson-Corley; Alicia K Olivier; Gail A Bishop; Hasem Habelhah
Journal:  J Cell Sci       Date:  2016-02-12       Impact factor: 5.285

Review 7.  Ubiquitin-proteasome signaling in lung injury.

Authors:  Natalia D Magnani; Laura A Dada; Jacob I Sznajder
Journal:  Transl Res       Date:  2018-04-23       Impact factor: 7.012

8.  PCNA-Ub polyubiquitination inhibits cell proliferation and induces cell-cycle checkpoints.

Authors:  Zhoushuai Qin; Zhiqiang Bai; Ying Sun; Xiaohong Niu; Wei Xiao
Journal:  Cell Cycle       Date:  2016-10-18       Impact factor: 4.534

Review 9.  Ubiquitin-binding domains - from structures to functions.

Authors:  Ivan Dikic; Soichi Wakatsuki; Kylie J Walters
Journal:  Nat Rev Mol Cell Biol       Date:  2009-10       Impact factor: 94.444

10.  IKKε-mediated tumorigenesis requires K63-linked polyubiquitination by a cIAP1/cIAP2/TRAF2 E3 ubiquitin ligase complex.

Authors:  Alicia Y Zhou; Rhine R Shen; Eejung Kim; Ying J Lock; Ming Xu; Zhijian J Chen; William C Hahn
Journal:  Cell Rep       Date:  2013-02-28       Impact factor: 9.423

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