Literature DB >> 19542331

Role of P450 monooxygenases in the degradation of the endocrine-disrupting chemical nonylphenol by the white rot fungus Phanerochaete chrysosporium.

Venkataramanan Subramanian1, Jagjit S Yadav.   

Abstract

The white rot fungus Phanerochaete chrysosporium extensively degraded the endocrine disruptor chemical nonylphenol (NP; 100% of 100 ppm) in both nutrient-limited cultures and nutrient-sufficient cultures. The P450 enzyme inhibitor piperonyl butoxide caused significant inhibition (approximately 75%) of the degradation activity in nutrient-rich malt extract (ME) cultures but no inhibition in defined low-nitrogen (LN) cultures, indicating an essential role of P450 monooxygenase(s) in NP degradation under nutrient-rich conditions. A genome-wide analysis using our custom-designed P450 microarray revealed significant induction of multiple P450 monooxygenase genes by NP: 18 genes were induced (2- to 195-fold) under nutrient-rich conditions, 17 genes were induced (2- to 6-fold) in LN cultures, and 3 were induced under both nutrient-rich and LN conditions. The P450 genes Pff 311b (corresponding to protein identification number [ID] 5852) and Pff 4a (protein ID 5001) showed extraordinarily high levels of induction (195- and 167-fold, respectively) in ME cultures. The P450 oxidoreductase (POR), glutathione S-transferase (gst), and cellulose metabolism genes were also induced in ME cultures. In contrast, certain metabolic genes, such as five of the peroxidase genes, showed partial downregulation by NP. This study provides the first evidence for the involvement of P450 enzymes in NP degradation by a white rot fungus and the first genome-wide identification of specific P450 genes responsive to an environmentally significant toxicant.

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Year:  2009        PMID: 19542331      PMCID: PMC2737932          DOI: 10.1128/AEM.02942-08

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  39 in total

1.  Assessing gene significance from cDNA microarray expression data via mixed models.

Authors:  R D Wolfinger; G Gibson; E D Wolfinger; L Bennett; H Hamadeh; P Bushel; C Afshari; R S Paules
Journal:  J Comput Biol       Date:  2001       Impact factor: 1.479

2.  Pharmaceuticals, hormones, and other organic wastewater contaminants in U.S. streams, 1999-2000: a national reconnaissance.

Authors:  Dana W Kolpin; Edward T Furlong; Michael T Meyer; E Michael Thurman; Steven D Zaugg; Larry B Barber; Herbert T Buxton
Journal:  Environ Sci Technol       Date:  2002-03-15       Impact factor: 9.028

3.  Chemical stress-responsive genes from the lignin-degrading fungus Phanerochaete chrysosporium exposed to dibenzo-p-dioxin.

Authors:  Hiroyuki Kurihara; Hiroyuki Wariishi; Hiroo Tanaka
Journal:  FEMS Microbiol Lett       Date:  2002-07-02       Impact factor: 2.742

4.  P450ome of the white rot fungus Phanerochaete chrysosporium: structure, evolution and regulation of expression of genomic P450 clusters.

Authors:  J S Yadav; H Doddapaneni; V Subramanian
Journal:  Biochem Soc Trans       Date:  2006-12       Impact factor: 5.407

5.  Physiological regulation, xenobiotic induction, and heterologous expression of P450 monooxygenase gene pc-3 (CYP63A3), a new member of the CYP63 gene cluster in the white-rot fungus Phanerochaete chrysosporium.

Authors:  Harshavardhan Doddapaneni; Venkataramanan Subramanian; Jagjit S Yadav
Journal:  Curr Microbiol       Date:  2005-06-13       Impact factor: 2.188

6.  The ability of white-rot fungi to degrade the endocrine-disrupting compound nonylphenol.

Authors:  Ana Soares; Karin Jonasson; Enrique Terrazas; Benoit Guieysse; Bo Mattiasson
Journal:  Appl Microbiol Biotechnol       Date:  2004-10-09       Impact factor: 4.813

Review 7.  Environmental fate of alkylphenols and alkylphenol ethoxylates--a review.

Authors:  Guang-Guo Ying; Brian Williams; Rai Kookana
Journal:  Environ Int       Date:  2002-07       Impact factor: 9.621

8.  Cluster analysis and display of genome-wide expression patterns.

Authors:  M B Eisen; P T Spellman; P O Brown; D Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-08       Impact factor: 11.205

9.  Biotransformation of linear alkylbenzene sulfonate (LAS) by Phanerochaete chrysosporium: oxidation of alkyl side-chain.

Authors:  J S Yadav; D L Lawrence; B A Nuck; T W Federle; C A Reddy
Journal:  Biodegradation       Date:  2001       Impact factor: 3.909

10.  Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78.

Authors:  Diego Martinez; Luis F Larrondo; Nik Putnam; Maarten D Sollewijn Gelpke; Katherine Huang; Jarrod Chapman; Kevin G Helfenbein; Preethi Ramaiya; J Chris Detter; Frank Larimer; Pedro M Coutinho; Bernard Henrissat; Randy Berka; Dan Cullen; Daniel Rokhsar
Journal:  Nat Biotechnol       Date:  2004-05-02       Impact factor: 54.908

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  15 in total

Review 1.  P450 monooxygenases (P450ome) of the model white rot fungus Phanerochaete chrysosporium.

Authors:  Khajamohiddin Syed; Jagjit S Yadav
Journal:  Crit Rev Microbiol       Date:  2012-05-25       Impact factor: 7.624

Review 2.  Untapped potential: exploiting fungi in bioremediation of hazardous chemicals.

Authors:  Hauke Harms; Dietmar Schlosser; Lukas Y Wick
Journal:  Nat Rev Microbiol       Date:  2011-02-07       Impact factor: 60.633

3.  Genome-to-function characterization of novel fungal P450 monooxygenases oxidizing polycyclic aromatic hydrocarbons (PAHs).

Authors:  Khajamohiddin Syed; Harshavardhan Doddapaneni; Venkataramanan Subramanian; Ying Wai Lam; Jagjit S Yadav
Journal:  Biochem Biophys Res Commun       Date:  2010-07-30       Impact factor: 3.575

4.  Gene expression metadata analysis reveals molecular mechanisms employed by Phanerochaete chrysosporium during lignin degradation and detoxification of plant extractives.

Authors:  Ayyappa Kumar Sista Kameshwar; Wensheng Qin
Journal:  Curr Genet       Date:  2017-03-08       Impact factor: 3.886

5.  A novel P450-initiated biphasic process for sustainable biodegradation of benzo[a]pyrene in soil under nutrient-sufficient conditions by the white rot fungus Phanerochaete chrysosporium.

Authors:  Sukanta S Bhattacharya; Khajamohiddin Syed; Jodi Shann; Jagjit S Yadav
Journal:  J Hazard Mater       Date:  2013-08-02       Impact factor: 10.588

6.  Genome-wide study of saprotrophy-related genes in the basal fungus Conidiobolus heterosporus.

Authors:  Yulong Wang; Yong Nie; Deshui Yu; Xiangyun Xie; Li Qin; Yang Yang; Bo Huang
Journal:  Appl Microbiol Biotechnol       Date:  2020-05-22       Impact factor: 4.813

7.  Biotransformation of petroleum asphaltenes and high molecular weight polycyclic aromatic hydrocarbons by Neosartorya fischeri.

Authors:  E Lorena Hernández-López; Lucia Perezgasga; Alejandro Huerta-Saquero; Rosa Mouriño-Pérez; Rafael Vazquez-Duhalt
Journal:  Environ Sci Pollut Res Int       Date:  2016-02-19       Impact factor: 4.223

8.  P450 redox enzymes in the white rot fungus Phanerochaete chrysosporium: gene transcription, heterologous expression, and activity analysis on the purified proteins.

Authors:  Venkataramanan Subramanian; Harshavardhan Doddapaneni; Khajamohiddin Syed; Jagjit S Yadav
Journal:  Curr Microbiol       Date:  2010-03-11       Impact factor: 2.188

9.  Transcriptomic responses of Phanerochaete chrysosporium to oak acetonic extracts: focus on a new glutathione transferase.

Authors:  Anne Thuillier; Kamel Chibani; Gemma Belli; Enrique Herrero; Stéphane Dumarçay; Philippe Gérardin; Annegret Kohler; Aurélie Deroy; Tiphaine Dhalleine; Raphael Bchini; Jean-Pierre Jacquot; Eric Gelhaye; Mélanie Morel-Rouhier
Journal:  Appl Environ Microbiol       Date:  2014-08-08       Impact factor: 4.792

10.  Involvement of cytochrome P450 in pentachlorophenol transformation in a white rot fungus Phanerochaete chrysosporium.

Authors:  Daliang Ning; Hui Wang
Journal:  PLoS One       Date:  2012-09-20       Impact factor: 3.240

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