Literature DB >> 22624627

P450 monooxygenases (P450ome) of the model white rot fungus Phanerochaete chrysosporium.

Khajamohiddin Syed1, Jagjit S Yadav.   

Abstract

Phanerochaete chrysosporium, the model white rot fungus, has been the focus of research for the past about four decades for understanding the mechanisms and processes of biodegradation of the natural aromatic polymer lignin and a broad range of environmental toxic chemicals. The ability to degrade this vast array of xenobiotic compounds was originally attributed to its lignin-degrading enzyme system, mainly the extracellular peroxidases. However, subsequent physiological, biochemical, and/or genetic studies by us and others identified the involvement of a peroxidase-independent oxidoreductase system, the cytochrome P450 monooxygenase system. The whole genome sequence revealed an extraordinarily large P450 contingent (P450ome) with an estimated 149 P450s in this organism. This review focuses on the current status of understanding on the P450 monooxygenase system of P. chrysosproium in terms of pre-genomic and post-genomic identification, structural and evolutionary analysis, transcriptional regulation, redox partners, and functional characterization for its biodegradative potential. Future research on this catalytically diverse oxidoreductase enzyme system and its major role as a newly emerged player in xenobiotic metabolism/degradation is discussed.

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Year:  2012        PMID: 22624627      PMCID: PMC3567848          DOI: 10.3109/1040841X.2012.682050

Source DB:  PubMed          Journal:  Crit Rev Microbiol        ISSN: 1040-841X            Impact factor:   7.624


  128 in total

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Authors:  Magnus Ingelman-Sundberg
Journal:  Trends Pharmacol Sci       Date:  2004-04       Impact factor: 14.819

2.  Degradation of environmental pollutants byPhanerochaete chrysosporium.

Authors:  S D Aust
Journal:  Microb Ecol       Date:  1990-12       Impact factor: 4.552

3.  Changes in the gene expression of the white rot fungus Phanerochaete chrysosporium due to the addition of atropine.

Authors:  Masahiko Minami; Kazumi Suzuki; Akifumi Shimizu; Tomohiro Hongo; Takaiku Sakamoto; Naoki Ohyama; Hironori Kitaura; Akiho Kusaka; Kenji Iwama; Toshikazu Irie
Journal:  Biosci Biotechnol Biochem       Date:  2009-08-07       Impact factor: 2.043

4.  Oxidation of persistent environmental pollutants by a white rot fungus.

Authors:  J A Bumpus; M Tien; D Wright; S D Aust
Journal:  Science       Date:  1985-06-21       Impact factor: 47.728

5.  Heterologous expression and mechanistic investigation of a fungal cytochrome P450 (CYP5150A2): involvement of alternative redox partners.

Authors:  Hirofumi Ichinose; Hiroyuki Wariishi
Journal:  Arch Biochem Biophys       Date:  2011-12-20       Impact factor: 4.013

6.  Biotransformation of linear alkylbenzene sulfonate (LAS) by Phanerochaete chrysosporium: oxidation of alkyl side-chain.

Authors:  J S Yadav; D L Lawrence; B A Nuck; T W Federle; C A Reddy
Journal:  Biodegradation       Date:  2001       Impact factor: 3.909

7.  Proteomic and metabolomic analyses of the white-rot fungus Phanerochaete chrysosporium exposed to exogenous benzoic acid.

Authors:  Fumiko Matsuzaki; Motoyuki Shimizu; Hiroyuki Wariishi
Journal:  J Proteome Res       Date:  2008-04-25       Impact factor: 4.466

8.  Degradation of phenanthrene by Phanerochaete chrysosporium occurs under ligninolytic as well as nonligninolytic conditions.

Authors:  S W Dhawale; S S Dhawale; D Dean-Ross
Journal:  Appl Environ Microbiol       Date:  1992-09       Impact factor: 4.792

9.  Biodegradation of crystal violet by the white rot fungus Phanerochaete chrysosporium.

Authors:  J A Bumpus; B J Brock
Journal:  Appl Environ Microbiol       Date:  1988-05       Impact factor: 4.792

10.  Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion.

Authors:  Diego Martinez; Jean Challacombe; Ingo Morgenstern; David Hibbett; Monika Schmoll; Christian P Kubicek; Patricia Ferreira; Francisco J Ruiz-Duenas; Angel T Martinez; Phil Kersten; Kenneth E Hammel; Amber Vanden Wymelenberg; Jill Gaskell; Erika Lindquist; Grzegorz Sabat; Sandra Splinter Bondurant; Luis F Larrondo; Paulo Canessa; Rafael Vicuna; Jagjit Yadav; Harshavardhan Doddapaneni; Venkataramanan Subramanian; Antonio G Pisabarro; José L Lavín; José A Oguiza; Emma Master; Bernard Henrissat; Pedro M Coutinho; Paul Harris; Jon Karl Magnuson; Scott E Baker; Kenneth Bruno; William Kenealy; Patrik J Hoegger; Ursula Kües; Preethi Ramaiya; Susan Lucas; Asaf Salamov; Harris Shapiro; Hank Tu; Christine L Chee; Monica Misra; Gary Xie; Sarah Teter; Debbie Yaver; Tim James; Martin Mokrejs; Martin Pospisek; Igor V Grigoriev; Thomas Brettin; Dan Rokhsar; Randy Berka; Dan Cullen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-04       Impact factor: 11.205

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  38 in total

1.  Rational engineering of the fungal P450 monooxygenase CYP5136A3 to improve its oxidizing activity toward polycyclic aromatic hydrocarbons.

Authors:  Khajamohiddin Syed; Aleksey Porollo; David Miller; Jagjit S Yadav
Journal:  Protein Eng Des Sel       Date:  2013-07-31       Impact factor: 1.650

2.  The fungus that came in from the cold: dry rot's pre-adapted ability to invade buildings.

Authors:  S V Balasundaram; J Hess; M B Durling; S C Moody; L Thorbek; C Progida; K LaButti; A Aerts; K Barry; I V Grigoriev; L Boddy; N Högberg; H Kauserud; D C Eastwood; I Skrede
Journal:  ISME J       Date:  2018-01-05       Impact factor: 10.302

3.  A novel P450-initiated biphasic process for sustainable biodegradation of benzo[a]pyrene in soil under nutrient-sufficient conditions by the white rot fungus Phanerochaete chrysosporium.

Authors:  Sukanta S Bhattacharya; Khajamohiddin Syed; Jodi Shann; Jagjit S Yadav
Journal:  J Hazard Mater       Date:  2013-08-02       Impact factor: 10.588

4.  Fungal Genomes and Insights into the Evolution of the Kingdom.

Authors:  Jason E Stajich
Journal:  Microbiol Spectr       Date:  2017-07

5.  Genome-wide study of saprotrophy-related genes in the basal fungus Conidiobolus heterosporus.

Authors:  Yulong Wang; Yong Nie; Deshui Yu; Xiangyun Xie; Li Qin; Yang Yang; Bo Huang
Journal:  Appl Microbiol Biotechnol       Date:  2020-05-22       Impact factor: 4.813

6.  CYP63A2, a catalytically versatile fungal P450 monooxygenase capable of oxidizing higher-molecular-weight polycyclic aromatic hydrocarbons, alkylphenols, and alkanes.

Authors:  Khajamohiddin Syed; Aleksey Porollo; Ying Wai Lam; Paul E Grimmett; Jagjit S Yadav
Journal:  Appl Environ Microbiol       Date:  2013-02-15       Impact factor: 4.792

7.  Biochemical Characterization of CYP505D6, a Self-Sufficient Cytochrome P450 from the White-Rot Fungus Phanerochaete chrysosporium.

Authors:  Kiyota Sakai; Fumiko Matsuzaki; Lisa Wise; Yu Sakai; Sadanari Jindou; Hirofumi Ichinose; Naoki Takaya; Masashi Kato; Hiroyuki Wariishi; Motoyuki Shimizu
Journal:  Appl Environ Microbiol       Date:  2018-10-30       Impact factor: 4.792

8.  Structural insights on bioremediation of polycyclic aromatic hydrocarbons using microalgae: a modelling-based computational study.

Authors:  Pandian SureshKumar; Jibu Thomas; Vasudevan Poornima
Journal:  Environ Monit Assess       Date:  2018-01-22       Impact factor: 2.513

9.  Redundancy among manganese peroxidases in Pleurotus ostreatus.

Authors:  Tomer M Salame; Doriv Knop; Dana Levinson; Oded Yarden; Yitzhak Hadar
Journal:  Appl Environ Microbiol       Date:  2013-02-01       Impact factor: 4.792

10.  Transcriptomic responses of Phanerochaete chrysosporium to oak acetonic extracts: focus on a new glutathione transferase.

Authors:  Anne Thuillier; Kamel Chibani; Gemma Belli; Enrique Herrero; Stéphane Dumarçay; Philippe Gérardin; Annegret Kohler; Aurélie Deroy; Tiphaine Dhalleine; Raphael Bchini; Jean-Pierre Jacquot; Eric Gelhaye; Mélanie Morel-Rouhier
Journal:  Appl Environ Microbiol       Date:  2014-08-08       Impact factor: 4.792

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