Literature DB >> 19542116

Oceanibaculum indicum gen. nov., sp. nov., isolated from deep seawater of the Indian Ocean.

Qiliang Lai1, Jun Yuan, Changliang Wu, Zongze Shao.   

Abstract

A taxonomic study was carried out on strain P24(T), which was isolated from a polycyclic aromatic hydrocarbon-degrading consortium, enriched from a deep-seawater sample collected from the Indian Ocean. The isolate was Gram-negative, rod-shaped, motile by means of a polar flagellum, moderately halophilic and capable of reducing nitrate to nitrite. Growth was observed at salinities of 0-9 % and at temperatures of 10-42 degrees C. The strain was unable to degrade Tween 80 or gelatin. The dominant fatty acids were C(16 : 0) (15.2 % of the total), C(18 : 0) (10.3 %), C(18 : 1)omega7c (52.0 %), C(18 : 1) 2-OH (4.7 %) and C(19 : 0)omega8c cyclo (4.7 %). The G+C content of the chromosomal DNA was 64.8 mol%. 16S rRNA gene sequence comparisons showed that strain P24(T) was related most closely to Thalassobaculum litoreum CL-GR58(T) (92.7 % similarity); levels of similarity between strain P24(T) and type strains of recognized species in the family Rhodospirillaceae were all less than 90.8 %. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain P24(T) formed a distinct evolutionary lineage within the family Rhodospirillaceae. Strain P24(T) could be distinguished from phylogenetically related genera based on differences in several phenotypic properties. On the basis of the phenotypic and phylogenetic data presented, strain P24(T) is considered to represent a novel species of a new genus, for which the name Oceanibaculum indicum gen. nov., sp. nov. is proposed. The type strain is P24(T) (=CCTCC AB 208226(T)=LMG 24626(T)=MCCC 1A02083(T)).

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Year:  2009        PMID: 19542116     DOI: 10.1099/ijs.0.004341-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

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2.  Genome sequence of Oceanibaculum indicum type strain P24.

Authors:  Qiliang Lai; Zongze Shao
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

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Journal:  Stand Genomic Sci       Date:  2011-12-23

4.  The diversity of PAH-degrading bacteria in a deep-sea water column above the Southwest Indian Ridge.

Authors:  Jun Yuan; Qiliang Lai; Fengqin Sun; Tianling Zheng; Zongze Shao
Journal:  Front Microbiol       Date:  2015-08-25       Impact factor: 5.640

5.  Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz.

Authors:  Francisco J R C Coelho; António Louvado; Patrícia M Domingues; Daniel F R Cleary; Marina Ferreira; Adelaide Almeida; Marina R Cunha; Ângela Cunha; Newton C M Gomes
Journal:  Sci Rep       Date:  2016-10-20       Impact factor: 4.379

  5 in total

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