Literature DB >> 19530249

Interaction and conformational dynamics of membrane-spanning protein helices.

Dieter Langosch1, Isaiah T Arkin.   

Abstract

Within 1 or 2 decades, the reputation of membrane-spanning alpha-helices has changed dramatically. Once mostly regarded as dull membrane anchors, transmembrane domains are now recognized as major instigators of protein-protein interaction. These interactions may be of exquisite specificity in mediating assembly of stable membrane protein complexes from cognate subunits. Further, they can be reversible and regulatable by external factors to allow for dynamic changes of protein conformation in biological function. Finally, these helices are increasingly regarded as dynamic domains. These domains can move relative to each other in different functional protein conformations. In addition, small-scale backbone fluctuations may affect their function and their impact on surrounding lipid shells. Elucidating the ways by which these intricate structural features are encoded by the amino acid sequences will be a fascinating subject of research for years to come.

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Year:  2009        PMID: 19530249      PMCID: PMC2775205          DOI: 10.1002/pro.154

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  213 in total

Review 1.  Peptide probes for protein transmembrane domains.

Authors:  Peter F Slivka; Johnny Wong; Gregory A Caputo; Hang Yin
Journal:  ACS Chem Biol       Date:  2008-07-18       Impact factor: 5.100

2.  Crystal structure of the ligand-free G-protein-coupled receptor opsin.

Authors:  Jung Hee Park; Patrick Scheerer; Klaus Peter Hofmann; Hui-Woog Choe; Oliver Peter Ernst
Journal:  Nature       Date:  2008-06-18       Impact factor: 49.962

3.  Sequence-specific conformational flexibility of SNARE transmembrane helices probed by hydrogen/deuterium exchange.

Authors:  Walter Stelzer; Bernhard C Poschner; Holger Stalz; Albert J Heck; Dieter Langosch
Journal:  Biophys J       Date:  2008-05-02       Impact factor: 4.033

4.  Crystal structure of the human beta2 adrenergic G-protein-coupled receptor.

Authors:  Søren G F Rasmussen; Hee-Jung Choi; Daniel M Rosenbaum; Tong Sun Kobilka; Foon Sun Thian; Patricia C Edwards; Manfred Burghammer; Venkata R P Ratnala; Ruslan Sanishvili; Robert F Fischetti; Gebhard F X Schertler; William I Weis; Brian K Kobilka
Journal:  Nature       Date:  2007-10-21       Impact factor: 49.962

5.  Atomic structure of a voltage-dependent K+ channel in a lipid membrane-like environment.

Authors:  Stephen B Long; Xiao Tao; Ernest B Campbell; Roderick MacKinnon
Journal:  Nature       Date:  2007-11-15       Impact factor: 49.962

6.  Structure of a beta1-adrenergic G-protein-coupled receptor.

Authors:  Tony Warne; Maria J Serrano-Vega; Jillian G Baker; Rouslan Moukhametzianov; Patricia C Edwards; Richard Henderson; Andrew G W Leslie; Christopher G Tate; Gebhard F X Schertler
Journal:  Nature       Date:  2008-06-25       Impact factor: 49.962

Review 7.  Protein-protein interactions in the membrane: sequence, structural, and biological motifs.

Authors:  David T Moore; Bryan W Berger; William F DeGrado
Journal:  Structure       Date:  2008-07       Impact factor: 5.006

8.  Phenylalanine promotes interaction of transmembrane domains via GxxxG motifs.

Authors:  Stephanie Unterreitmeier; Angelika Fuchs; Teresa Schäffler; Roland G Heym; Dmitrij Frishman; Dieter Langosch
Journal:  J Mol Biol       Date:  2007-09-26       Impact factor: 5.469

9.  Modest stabilization by most hydrogen-bonded side-chain interactions in membrane proteins.

Authors:  Nathan Hyunjoong Joh; Andrew Min; Salem Faham; Julian P Whitelegge; Duan Yang; Virgil L Woods; James U Bowie
Journal:  Nature       Date:  2008-05-25       Impact factor: 49.962

10.  Dimerization of the transmembrane domain of amyloid precursor proteins and familial Alzheimer's disease mutants.

Authors:  Paul M Gorman; Sanguk Kim; Meng Guo; Roman A Melnyk; Joanne McLaurin; Paul E Fraser; James U Bowie; Avijit Chakrabartty
Journal:  BMC Neurosci       Date:  2008-01-30       Impact factor: 3.288

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  54 in total

Review 1.  Structure elucidation of dimeric transmembrane domains of bitopic proteins.

Authors:  Eduard V Bocharov; Pavel E Volynsky; Konstantin V Pavlov; Roman G Efremov; Alexander S Arseniev
Journal:  Cell Adh Migr       Date:  2010-05-01       Impact factor: 3.405

Review 2.  Single-spanning transmembrane domains in cell growth and cell-cell interactions: More than meets the eye?

Authors:  Pierre Hubert; Paul Sawma; Jean-Pierre Duneau; Jonathan Khao; Jérôme Hénin; Dominique Bagnard; James Sturgis
Journal:  Cell Adh Migr       Date:  2010-04-20       Impact factor: 3.405

3.  Functional dynamics in the voltage-dependent anion channel.

Authors:  Saskia Villinger; Rodolfo Briones; Karin Giller; Ulrich Zachariae; Adam Lange; Bert L de Groot; Christian Griesinger; Stefan Becker; Markus Zweckstetter
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-10       Impact factor: 11.205

4.  Residue-specific side-chain packing determines the backbone dynamics of transmembrane model helices.

Authors:  Stefan Quint; Simon Widmaier; David Minde; Daniel Hornburg; Dieter Langosch; Christina Scharnagl
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

5.  Residue-specific structural kinetics of proteins through the union of isotope labeling, mid-IR pulse shaping, and coherent 2D IR spectroscopy.

Authors:  Chris T Middleton; Ann Marie Woys; Sudipta S Mukherjee; Martin T Zanni
Journal:  Methods       Date:  2010-05-22       Impact factor: 3.608

6.  Trimeric transmembrane domain interactions in paramyxovirus fusion proteins: roles in protein folding, stability, and function.

Authors:  Everett Clinton Smith; Stacy E Smith; James R Carter; Stacy R Webb; Kathleen M Gibson; Lance M Hellman; Michael G Fried; Rebecca Ellis Dutch
Journal:  J Biol Chem       Date:  2013-10-31       Impact factor: 5.157

7.  Crystal structure of the nonerythroid alpha-spectrin tetramerization site reveals differences between erythroid and nonerythroid spectrin tetramer formation.

Authors:  Shahila Mehboob; Yuanli Song; Marta Witek; Fei Long; Bernard D Santarsiero; Michael E Johnson; Leslie W-M Fung
Journal:  J Biol Chem       Date:  2010-03-14       Impact factor: 5.157

Review 8.  Transmembrane helix-helix interactions involved in ErbB receptor signaling.

Authors:  Florian Cymer; Dirk Schneider
Journal:  Cell Adh Migr       Date:  2010-04-13       Impact factor: 3.405

9.  Helix-destabilizing, beta-branched, and polar residues in the baboon reovirus p15 transmembrane domain influence the modularity of FAST proteins.

Authors:  Eileen K Clancy; Roy Duncan
Journal:  J Virol       Date:  2011-03-02       Impact factor: 5.103

10.  Hendra virus fusion protein transmembrane domain contributes to pre-fusion protein stability.

Authors:  Stacy Webb; Tamas Nagy; Hunter Moseley; Michael Fried; Rebecca Dutch
Journal:  J Biol Chem       Date:  2017-02-17       Impact factor: 5.157

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