Literature DB >> 19508238

Saddlepoint approximations to the moments of multitype age-dependent branching processes, with applications.

O Hyrien1, R Chen, M Mayer-Pröschel, M Noble.   

Abstract

This article proposes saddlepoint approximations to the expectation and variance-covariance function of multitype age-dependent branching processes. The proposed approximations are found accurate, easy to implement, and much faster to compute than by simulating the process. Multiple applications are presented, including the analyses of clonal data on the generation of oligodendrocytes from their immediate progenitor cells, and on the proliferation of Hela cells. New estimators are also constructed to analyze clonal data. The proposed methods are finally used to approximate the distribution of the generation, which has recently found several applications in cell biology.

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Year:  2009        PMID: 19508238      PMCID: PMC2888915          DOI: 10.1111/j.1541-0420.2009.01281.x

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  19 in total

1.  Estimation problems associated with stochastic modeling of proliferation and differentiation of O-2A progenitor cells in vitro.

Authors:  A Zorin; M Mayer-Proschel; M Noble; A Y Yakovlev
Journal:  Math Biosci       Date:  2000-10       Impact factor: 2.144

2.  An alternative stochastic model of generation of oligodendrocytes in cell culture.

Authors:  K Boucher; A Zorin; A Y Yakovlev; M Mayer-Proschel; M Noble
Journal:  J Math Biol       Date:  2001-07       Impact factor: 2.259

3.  A stochastic model of brain cell differentiation in tissue culture.

Authors:  A Y Yakovlev; M Mayer-Proschel; M Noble
Journal:  J Math Biol       Date:  1998-07       Impact factor: 2.259

4.  Quantitative insight into proliferation and differentiation of oligodendrocyte type 2 astrocyte progenitor cells in vitro.

Authors:  A Y Yakovlev; K Boucher; M Mayer-Proschel; M Noble
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-24       Impact factor: 11.205

5.  Inference for an age-dependent, multitype branching-process model of mast cells.

Authors:  J Nedelman; H Downs; P Pharr
Journal:  J Math Biol       Date:  1987       Impact factor: 2.259

6.  Estimating the generation-time distribution of an age-dependent branching process.

Authors:  D G Hoel; K S Crump
Journal:  Biometrics       Date:  1974-03       Impact factor: 2.571

7.  Platelet-derived growth factor promotes division and motility and inhibits premature differentiation of the oligodendrocyte/type-2 astrocyte progenitor cell.

Authors:  M Noble; K Murray; P Stroobant; M D Waterfield; P Riddle
Journal:  Nature       Date:  1988-06-09       Impact factor: 49.962

8.  A glial progenitor cell that develops in vitro into an astrocyte or an oligodendrocyte depending on culture medium.

Authors:  M C Raff; R H Miller; M Noble
Journal:  Nature       Date:  1983 Jun 2-8       Impact factor: 49.962

9.  Models for yeast prions.

Authors:  B J T Morgan; M S Ridout; L W Ruddock
Journal:  Biometrics       Date:  2003-09       Impact factor: 2.571

10.  Approximations for expected generation number.

Authors:  D J Cole; M S Ridout; B J T Morgan; L J Byrne; M F Tuite
Journal:  Biometrics       Date:  2007-04-09       Impact factor: 2.571

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  12 in total

1.  A composite likelihood approach to the analysis of longitudinal clonal data on multitype cellular systems under an age-dependent branching process.

Authors:  Rui Chen; Ollivier Hyrien; Mark Noble; Margot Mayer-Pröschel
Journal:  Biostatistics       Date:  2010-08-23       Impact factor: 5.899

2.  Calculations for multi-type age-dependent binary branching processes.

Authors:  Graham Jones
Journal:  J Math Biol       Date:  2010-08-27       Impact factor: 2.259

3.  Stochastic modeling of stress erythropoiesis using a two-type age-dependent branching process with immigration.

Authors:  O Hyrien; S A Peslak; N M Yanev; J Palis
Journal:  J Math Biol       Date:  2014-07-03       Impact factor: 2.259

4.  Asymptotic behavior of cell populations described by two-type reducible age-dependent branching processes with non-homogeneous immigration().

Authors:  Ollivier Hyrien; Nikolay M Yanev
Journal:  Math Popul Stud       Date:  2012-10-05       Impact factor: 0.720

5.  Mathematical and experimental approaches to identify and predict the effects of chemotherapy on neuroglial precursors.

Authors:  Ollivier Hyrien; Jörg Dietrich; Mark Noble
Journal:  Cancer Res       Date:  2010-11-05       Impact factor: 12.701

6.  Quasi- and pseudo-maximum likelihood estimators for discretely observed continuous-time Markov branching processes.

Authors:  Rui Chen; Ollivier Hyrien
Journal:  J Stat Plan Inference       Date:  2011-07-01       Impact factor: 1.111

7.  An age-dependent branching process model for the analysis of CFSE-labeling experiments.

Authors:  Ollivier Hyrien; Rui Chen; Martin S Zand
Journal:  Biol Direct       Date:  2010-06-22       Impact factor: 4.540

8.  Quantifying T lymphocyte turnover.

Authors:  Rob J De Boer; Alan S Perelson
Journal:  J Theor Biol       Date:  2013-01-09       Impact factor: 2.691

9.  A test of homogeneity for age-dependent branching processes with immigration.

Authors:  Ollivier Hyrien; Nikolay M Yanev; Craig T Jordan
Journal:  Electron J Stat       Date:  2015-05-22       Impact factor: 1.125

10.  Two-Type Age-Dependent Branching Processes with Inhomogeneous Immigration as Models of Renewing Cell Populations.

Authors:  Ollivier Hyrien; Nikolay M Yanev
Journal:  Pliska       Date:  2011
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