Literature DB >> 19505576

Strategies for performing genotype-phenotype association studies in nonhuman primates.

Christina S Barr1.   

Abstract

Anthropoid primate models offer opportunities to study genetic influence on alcohol consumption and alcohol-related intermediate phenotypes in socially and behaviorally complex animal models that are closely related to humans, and in which functionally equivalent or orthologous genetic variants exist. This review will discuss the methods commonly used for performing candidate gene-based studies in rhesus macaques in order to model how functional genetic variation moderates risk for human psychiatric disorders. Various in silico and in vitro approaches to identifying functional genetic variants for performance of these studies will be discussed. Next, I will provide examples of how this approach can be used for performing candidate gene-based studies and for examining gene by environment interactions. Finally, these approaches will then be placed in the context of how function-guided studies can inform us of genetic variants that may be under selection across species, demonstrating how functional genetic variants that may have conferred selective advantage at some point in the evolutionary history of humans could increase risk for addictive disorders in modern society.

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Year:  2009        PMID: 19505576      PMCID: PMC2739376          DOI: 10.1016/j.ymeth.2009.05.014

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  55 in total

1.  The power of association studies to detect the contribution of candidate genetic loci to variation in complex traits.

Authors:  A D Long; C H Langley
Journal:  Genome Res       Date:  1999-08       Impact factor: 9.043

2.  An intronic polymorphic domain often associated with susceptibility to affective disorders has allele dependent differential enhancer activity in embryonic stem cells.

Authors:  C E Fiskerstrand; E A Lovejoy; J P Quinn
Journal:  FEBS Lett       Date:  1999-09-17       Impact factor: 4.124

3.  Early experience and serotonin transporter gene variation interact to influence primate CNS function.

Authors:  A J Bennett; K P Lesch; A Heils; J C Long; J G Lorenz; S E Shoaf; M Champoux; S J Suomi; M V Linnoila; J D Higley
Journal:  Mol Psychiatry       Date:  2002       Impact factor: 15.992

4.  TRANSCompel: a database on composite regulatory elements in eukaryotic genes.

Authors:  Olga V Kel-Margoulis; Alexander E Kel; Ingmar Reuter; Igor V Deineko; Edgar Wingender
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

5.  Mfold web server for nucleic acid folding and hybridization prediction.

Authors:  Michael Zuker
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

6.  Serotonin transporter gene polymorphism, differential early rearing, and behavior in rhesus monkey neonates.

Authors:  M Champoux; A Bennett; C Shannon; J D Higley; K P Lesch; S J Suomi
Journal:  Mol Psychiatry       Date:  2002       Impact factor: 15.992

7.  Natal dispersal in rhesus macaques is related to serotonin transporter gene promoter variation.

Authors:  A Trefilov; J Berard; M Krawczak; J Schmidtke
Journal:  Behav Genet       Date:  2000-07       Impact factor: 2.805

Review 8.  Plasticity of the hippocampus: adaptation to chronic stress and allostatic load.

Authors:  B S McEwen
Journal:  Ann N Y Acad Sci       Date:  2001-03       Impact factor: 5.691

9.  Autoradiographic and in situ hybridization localization of corticotropin-releasing factor 1 and 2 receptors in nonhuman primate brain.

Authors:  M M Sánchez; L J Young; P M Plotsky; T R Insel
Journal:  J Comp Neurol       Date:  1999-06-07       Impact factor: 3.215

10.  Distribution of corticosteroid receptors in the rhesus brain: relative absence of glucocorticoid receptors in the hippocampal formation.

Authors:  M M Sánchez; L J Young; P M Plotsky; T R Insel
Journal:  J Neurosci       Date:  2000-06-15       Impact factor: 6.167

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  1 in total

Review 1.  Nonhuman primate models in the genomic era: a paradigm shift.

Authors:  Eric J Vallender; Gregory M Miller
Journal:  ILAR J       Date:  2013
  1 in total

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