Literature DB >> 19504257

QTL analysis of early stage heterosis for biomass in Arabidopsis.

Rhonda Christiane Meyer1, Barbara Kusterer, Jan Lisec, Matthias Steinfath, Martina Becher, Hanno Scharr, Albrecht E Melchinger, Joachim Selbig, Ulrich Schurr, Lothar Willmitzer, Thomas Altmann.   

Abstract

The main objective of this study was to identify genomic regions involved in biomass heterosis using QTL, generation means, and mode-of-inheritance classification analyses. In a modified North Carolina Design III we backcrossed 429 recombinant inbred line and 140 introgression line populations to the two parental accessions, C24 and Col-0, whose F (1) hybrid exhibited 44% heterosis for biomass. Mid-parent heterosis in the RILs ranged from -31 to 99% for dry weight and from -58 to 143% for leaf area. We detected ten genomic positions involved in biomass heterosis at an early developmental stage, individually explaining between 2.4 and 15.7% of the phenotypic variation. While overdominant gene action was prevalent in heterotic QTL, our results suggest that a combination of dominance, overdominance and epistasis is involved in biomass heterosis in this Arabidopsis cross.

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Year:  2010        PMID: 19504257      PMCID: PMC2793381          DOI: 10.1007/s00122-009-1074-6

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  45 in total

1.  Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time.

Authors:  U Johanson; J West; C Lister; S Michaels; R Amasino; C Dean
Journal:  Science       Date:  2000-10-13       Impact factor: 47.728

2.  Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers.

Authors:  C W Stuber; S E Lincoln; D W Wolff; T Helentjaris; E S Lander
Journal:  Genetics       Date:  1992-11       Impact factor: 4.562

3.  Heterosis and the genetics of complex characters.

Authors:  W WILLIAMS
Journal:  Nature       Date:  1959-08-15       Impact factor: 49.962

Review 4.  Heterosis: revisiting the magic.

Authors:  Zachary B Lippman; Dani Zamir
Journal:  Trends Genet       Date:  2006-12-22       Impact factor: 11.639

5.  Alternative Hypotheses of Hybrid Vigor.

Authors:  J F Crow
Journal:  Genetics       Date:  1948-09       Impact factor: 4.562

6.  Construction and analysis of 2 reciprocal Arabidopsis introgression line populations.

Authors:  Ottó Törjék; Rhonda C Meyer; Maik Zehnsdorf; Melanie Teltow; Georg Strompen; Hanna Witucka-Wall; Anna Blacha; Thomas Altmann
Journal:  J Hered       Date:  2008-02-28       Impact factor: 2.645

7.  QTLNetwork: mapping and visualizing genetic architecture of complex traits in experimental populations.

Authors:  Jian Yang; Chengcheng Hu; Han Hu; Rongdong Yu; Zhen Xia; Xiuzi Ye; Jun Zhu
Journal:  Bioinformatics       Date:  2008-01-17       Impact factor: 6.937

8.  Dominance, overdominance and epistasis condition the heterosis in two heterotic rice hybrids.

Authors:  Lanzhi Li; Kaiyang Lu; Zhaoming Chen; Tongmin Mu; Zhongli Hu; Xinqi Li
Journal:  Genetics       Date:  2008-09-14       Impact factor: 4.562

9.  Dynamics of seedling growth acclimation towards altered light conditions can be quantified via GROWSCREEN: a setup and procedure designed for rapid optical phenotyping of different plant species.

Authors:  Achim Walter; Hanno Scharr; Frank Gilmer; Rainer Zierer; Kerstin A Nagel; Michaela Ernst; Anika Wiese; Olivia Virnich; Maja M Christ; Beate Uhlig; Sybille Jünger; Uli Schurr
Journal:  New Phytol       Date:  2007       Impact factor: 10.151

10.  Heterosis in the freezing tolerance, and sugar and flavonoid contents of crosses between Arabidopsis thaliana accessions of widely varying freezing tolerance.

Authors:  Marina Korn; Silke Peterek; Hans-Peter Mock; Arnd G Heyer; Dirk K Hincha
Journal:  Plant Cell Environ       Date:  2008-02-13       Impact factor: 7.228

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  35 in total

Review 1.  Natural variation in Arabidopsis: from molecular genetics to ecological genomics.

Authors:  Detlef Weigel
Journal:  Plant Physiol       Date:  2011-12-06       Impact factor: 8.340

2.  SNP marker integration and QTL analysis of 12 agronomic and morphological traits in F₈ RILs of pepper (Capsicum annuum L.).

Authors:  Fu-Hao Lu; Soon-Wook Kwon; Min-Young Yoon; Ki-Taek Kim; Myeong-Cheoul Cho; Moo-Kyung Yoon; Yong-Jin Park
Journal:  Mol Cells       Date:  2012-06-08       Impact factor: 5.034

3.  Heterosis.

Authors:  James A Birchler; Hong Yao; Sivanandan Chudalayandi; Daniel Vaiman; Reiner A Veitia
Journal:  Plant Cell       Date:  2010-07-09       Impact factor: 11.277

4.  Natural variation in timing of stress-responsive gene expression predicts heterosis in intraspecific hybrids of Arabidopsis.

Authors:  Marisa Miller; Qingxin Song; Xiaoli Shi; Thomas E Juenger; Z Jeffrey Chen
Journal:  Nat Commun       Date:  2015-07-08       Impact factor: 14.919

5.  Genomic architecture of biomass heterosis in Arabidopsis.

Authors:  Mei Yang; Xuncheng Wang; Diqiu Ren; Hao Huang; Miqi Xu; Guangming He; Xing Wang Deng
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-10       Impact factor: 11.205

6.  Genetic architecture of nonadditive inheritance in Arabidopsis thaliana hybrids.

Authors:  Danelle K Seymour; Eunyoung Chae; Dominik G Grimm; Carmen Martín Pizarro; Anette Habring-Müller; François Vasseur; Barbara Rakitsch; Karsten M Borgwardt; Daniel Koenig; Detlef Weigel
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-01       Impact factor: 11.205

7.  Heterosis and outbreeding depression in crosses between natural populations of Arabidopsis thaliana.

Authors:  C G Oakley; J Ågren; D W Schemske
Journal:  Heredity (Edinb)       Date:  2015-03-18       Impact factor: 3.821

8.  Genome-wide analysis of DNA methylation and gene expression changes in two Arabidopsis ecotypes and their reciprocal hybrids.

Authors:  Huaishun Shen; Hang He; Jigang Li; Wei Chen; Xuncheng Wang; Lan Guo; Zhiyu Peng; Guangming He; Shangwei Zhong; Yijun Qi; William Terzaghi; Xing Wang Deng
Journal:  Plant Cell       Date:  2012-03-20       Impact factor: 11.277

9.  Comparative transcriptional profiling and preliminary study on heterosis mechanism of super-hybrid rice.

Authors:  Gui-Sheng Song; Hong-Li Zhai; Yong-Gang Peng; Lei Zhang; Gang Wei; Xiao-Ying Chen; Yu-Guo Xiao; Lili Wang; Yue-Jun Chen; Bin Wu; Bin Chen; Yu Zhang; Hua Chen; Xiu-Jing Feng; Wan-Kui Gong; Yao Liu; Zhi-Jie Yin; Feng Wang; Guo-Zhen Liu; Hong-Lin Xu; Xiao-Li Wei; Xiao-Ling Zhao; Pieter B F Ouwerkerk; Thomas Hankemeier; Theo Reijmers; Rob van der Heijden; Cong-Ming Lu; Mei Wang; Jan van der Greef; Zhen Zhu
Journal:  Mol Plant       Date:  2010-08-20       Impact factor: 13.164

10.  Comparative mapping of quantitative trait loci involved in heterosis for seedling and yield traits in oilseed rape (Brassica napus L.).

Authors:  P Basunanda; M Radoev; W Ecke; W Friedt; H C Becker; R J Snowdon
Journal:  Theor Appl Genet       Date:  2010-01       Impact factor: 5.699

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