Literature DB >> 18202029

QTLNetwork: mapping and visualizing genetic architecture of complex traits in experimental populations.

Jian Yang1, Chengcheng Hu, Han Hu, Rongdong Yu, Zhen Xia, Xiuzi Ye, Jun Zhu.   

Abstract

SUMMARY: QTLNetwork is a software package for mapping and visualizing the genetic architecture underlying complex traits for experimental populations derived from a cross between two inbred lines. It can simultaneously map quantitative trait loci (QTL) with individual effects, epistasis and QTL-environment interaction. Currently, it is able to handle data from F(2), backcross, recombinant inbred lines and double-haploid populations, as well as populations from specific mating designs (immortalized F(2) and BC(n)F(n) populations). The Windows version of QTLNetwork was developed with a graphical user interface. Alternatively, the command-line versions have the facility to be run in other prevalent operating systems, such as Linux, Unix and MacOS. AVAILABILITY: http://ibi.zju.edu.cn/software/qtlnetwork.

Mesh：

Year:  2008        PMID： 18202029     DOI： 10.1093/bioinformatics/btm494

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  139 in total

1.  Characterization of QTL for oil content in maize kernel.

Authors:  Xiaohong Yang; Hailin Ma; Pan Zhang; Jianbing Yan; Yuqiu Guo; Tongming Song; Jiansheng Li
Journal:  Theor Appl Genet       Date:  2012-06-06       Impact factor: 5.699

2.  Identification of a major QTL for silique length and seed weight in oilseed rape (Brassica napus L.).

Authors:  Pu Yang; Chang Shu; Lin Chen; Jinsong Xu; Jiangsheng Wu; Kede Liu
Journal:  Theor Appl Genet       Date:  2012-03-11       Impact factor: 5.699

3.  Identifying novel QTLs for submergence tolerance in rice cultivars IR72 and Madabaru.

Authors:  Endang M Septiningsih; Darlene L Sanchez; Namrata Singh; Pamella M D Sendon; Alvaro M Pamplona; Sigrid Heuer; David J Mackill
Journal:  Theor Appl Genet       Date:  2011-11-15       Impact factor: 5.699

4.  SNP marker integration and QTL analysis of 12 agronomic and morphological traits in F₈ RILs of pepper (Capsicum annuum L.).

Authors:  Fu-Hao Lu; Soon-Wook Kwon; Min-Young Yoon; Ki-Taek Kim; Myeong-Cheoul Cho; Moo-Kyung Yoon; Yong-Jin Park
Journal:  Mol Cells       Date:  2012-06-08       Impact factor: 5.034

5.  Mapping and validation of quantitative trait loci associated with wheat yellow mosaic bymovirus resistance in bread wheat.

Authors:  Xiaobiao Zhu; Haiyan Wang; Jiao Guo; Zhenzhen Wu; Aizhong Cao; Tongde Bie; Mingjuan Nie; Frank M You; Zhaobang Cheng; Jin Xiao; Yangyang Liu; Shunhe Cheng; Peidu Chen; Xiue Wang
Journal:  Theor Appl Genet       Date:  2011-09-30       Impact factor: 5.699

6.  Detection of two major grain yield QTL in bread wheat (Triticum aestivum L.) under heat, drought and high yield potential environments.

Authors:  Dion Bennett; Matthew Reynolds; Daniel Mullan; Ali Izanloo; Haydn Kuchel; Peter Langridge; Thorsten Schnurbusch
Journal:  Theor Appl Genet       Date:  2012-07-08       Impact factor: 5.699

7.  Identification of stable QTLs causing chalk in rice grains in nine environments.

Authors:  Xiangqian Zhao; Venea D Daygon; Kenneth L McNally; Ruaraidh Sackville Hamilton; Fangming Xie; Russell F Reinke; Melissa A Fitzgerald
Journal:  Theor Appl Genet       Date:  2016-01       Impact factor: 5.699

8.  Genetic components and major QTL confer resistance to bean pyralid (Lamprosema indicata Fabricius) under multiple environments in four RIL populations of soybean.

Authors:  Guangnan Xing; Bin Zhou; Yufeng Wang; Tuanjie Zhao; Deyue Yu; Shouyi Chen; Junyi Gai
Journal:  Theor Appl Genet       Date:  2012-05-12       Impact factor: 5.699

9.  QTL mapping for combining ability in different population-based NCII designs: a simulation study.

Authors:  Lanzhi Li; Congwei Sun; Yuan Chen; Zhijun Dai; Zhen Qu; Xingfei Zheng; Sibin Yu; Tongmin Mou; Chenwu Xu; Zhongli Hu
Journal:  J Genet       Date:  2013-12       Impact factor: 1.166

10.  Identification of genomic regions involved in resistance against Sclerotinia sclerotiorum from wild Brassica oleracea.

Authors:  Jiaqin Mei; Yijuan Ding; Kun Lu; Dayong Wei; Yao Liu; Joseph Onwusemu Disi; Jiana Li; Liezhao Liu; Shengyi Liu; John McKay; Wei Qian
Journal:  Theor Appl Genet       Date:  2012-10-25       Impact factor: 5.699
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