Literature DB >> 19496330

Adaptive evolution of genes of archaea belonging to the genus Pyrococcus associated with adaptation to life under high-pressure conditions.

K V Gunbin1, D A Afonnikov, E V Boldyreva, N A Kolchanov.   

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Year:  2009        PMID： 19496330     DOI： 10.1134/s1607672909020094

Source DB:  PubMed          Journal:  Dokl Biochem Biophys        ISSN： 1607-6729            Impact factor:   0.788


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  10 in total

1.  HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes.

Authors:  S Garcia-Vallve; E Guzman; M A Montero; A Romeu
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

3.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

4.  Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level.

Authors:  Jianzhi Zhang; Rasmus Nielsen; Ziheng Yang
Journal:  Mol Biol Evol       Date:  2005-08-17       Impact factor: 16.240

Review 5.  Origins of life and biochemistry under high-pressure conditions.

Authors:  Isabelle Daniel; Philippe Oger; Roland Winter
Journal:  Chem Soc Rev       Date:  2006-08-29       Impact factor: 54.564

6.  PAML 4: phylogenetic analysis by maximum likelihood.

Authors:  Ziheng Yang
Journal:  Mol Biol Evol       Date:  2007-05-04       Impact factor: 16.240

7.  Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes.

Authors:  Toshiaki Fukui; Haruyuki Atomi; Tamotsu Kanai; Rie Matsumi; Shinsuke Fujiwara; Tadayuki Imanaka
Journal:  Genome Res       Date:  2005-02-14       Impact factor: 9.043

8.  Recent developments in the MAFFT multiple sequence alignment program.

Authors:  Kazutaka Katoh; Hiroyuki Toh
Journal:  Brief Bioinform       Date:  2008-03-27       Impact factor: 11.622

9.  Synonymous and nonsynonymous rate variation in nuclear genes of mammals.

Authors:  Z Yang; R Nielsen
Journal:  J Mol Evol       Date:  1998-04       Impact factor: 2.395

10.  Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea.

Authors:  O Lecompte; R Ripp; V Puzos-Barbe; S Duprat; R Heilig; J Dietrich; J C Thierry; O Poch
Journal:  Genome Res       Date:  2001-06       Impact factor: 9.043
  10 in total
  1 in total

1.  Comparative Genomics Provides Insights into the Genetic Diversity and Evolution of the DPANN Superphylum.

Authors:  Liangzhi Li; Zhenghua Liu; Zhicheng Zhou; Min Zhang; Delong Meng; Xueduan Liu; Ye Huang; Xiutong Li; Zhen Jiang; Shuiping Zhong; Lukasz Drewniak; Zhendong Yang; Qian Li; Yongjun Liu; Xiaolong Nan; Biguang Jiang; Chengying Jiang; Huaqun Yin
Journal:  mSystems       Date:  2021-07-13       Impact factor: 6.496
  1 in total

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