Literature DB >> 19490096

Thiamin diphosphate in biological chemistry: exploitation of diverse thiamin diphosphate-dependent enzymes for asymmetric chemoenzymatic synthesis.

Michael Müller1, Dörte Gocke, Martina Pohl.   

Abstract

Thiamin diphosphate-dependent enzymes participate in numerous biosynthetic pathways and catalyse a broad range of reactions, mainly involving the cleavage and formation of C-C bonds. For example, they catalyse the nonoxidative and oxidative decarboxylation of 2-keto acids, produce 2-hydroxy ketones and transfer activated aldehydes to a variety of acceptors. Moreover, they can also catalyse C-N, C-O and C-S bond formation. Because of their substrate spectra and different stereospecificity, these enzymes extend the synthetic potential for asymmetric carboligations appreciably. Different strategies have been developed to identify new members of this promiscuous enzyme class and the reactions they catalyse. This enabled us to introduce solutions for longstanding synthetic problems, such as asymmetric cross-benzoin condensation. Moreover, through a combination of protein structure analysis, enzyme and substrate engineering, and screening methods we explored additional stereochemical routes that have not been described previously for any of these interesting enzymes.

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Year:  2009        PMID: 19490096     DOI: 10.1111/j.1742-4658.2009.07017.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  18 in total

1.  Identification of mitochondrial thiamin diphosphate carriers from Arabidopsis and maize.

Authors:  Océane Frelin; Gennaro Agrimi; Valentina L Laera; Alessandra Castegna; Lynn G L Richardson; Robert T Mullen; Claudia Lerma-Ortiz; Ferdinando Palmieri; Andrew D Hanson
Journal:  Funct Integr Genomics       Date:  2012-03-18       Impact factor: 3.410

2.  Assignment of function to histidines 260 and 298 by engineering the E1 component of the Escherichia coli 2-oxoglutarate dehydrogenase complex; substitutions that lead to acceptance of substrates lacking the 5-carboxyl group.

Authors:  Da Jeong Shim; Natalia S Nemeria; Anand Balakrishnan; Hetalben Patel; Jaeyoung Song; Junjie Wang; Frank Jordan; Edgardo T Farinas
Journal:  Biochemistry       Date:  2011-08-10       Impact factor: 3.162

3.  A tris (2-carboxyethyl) phosphine (TCEP) related cleavage on cysteine-containing proteins.

Authors:  Peiran Liu; Brian W O'Mara; Bethanne M Warrack; Wei Wu; Yunping Huang; Yihong Zhang; Rulin Zhao; Mei Lin; Michael S Ackerman; Peter K Hocknell; Guodong Chen; Li Tao; Siegfried Rieble; Jack Wang; David B Wang-Iverson; Adrienne A Tymiak; Michael J Grace; Reb J Russell
Journal:  J Am Soc Mass Spectrom       Date:  2010-01-28       Impact factor: 3.109

4.  DXP synthase-catalyzed C-N bond formation: nitroso substrate specificity studies guide selective inhibitor design.

Authors:  Francine Morris; Ryan Vierling; Lauren Boucher; Jürgen Bosch; Caren L Freel Meyers
Journal:  Chembiochem       Date:  2013-07-03       Impact factor: 3.164

5.  A protecting group-free synthesis of deazathiamine: a step toward inhibitor design.

Authors:  Hong Zhao; Luiz Pedro S de Carvalho; Carl Nathan; Ouathek Ouerfelli
Journal:  Bioorg Med Chem Lett       Date:  2010-09-16       Impact factor: 2.823

6.  Substrate specificity of thiamine pyrophosphate-dependent 2-oxo-acid decarboxylases in Saccharomyces cerevisiae.

Authors:  Gabriele Romagnoli; Marijke A H Luttik; Peter Kötter; Jack T Pronk; Jean-Marc Daran
Journal:  Appl Environ Microbiol       Date:  2012-08-17       Impact factor: 4.792

7.  Revealing substrate promiscuity of 1-deoxy-D-xylulose 5-phosphate synthase.

Authors:  Leighanne A Brammer; Caren Freel Meyers
Journal:  Org Lett       Date:  2009-10-15       Impact factor: 6.005

8.  The Thiamine diphosphate dependent Enzyme Engineering Database: a tool for the systematic analysis of sequence and structure relations.

Authors:  Michael Widmann; Robert Radloff; Jürgen Pleiss
Journal:  BMC Biochem       Date:  2010-02-01       Impact factor: 4.059

9.  Investigation of the donor and acceptor range for chiral carboligation catalyzed by the E1 component of the 2-oxoglutarate dehydrogenase complex.

Authors:  Hetalben Patel; Da Jeong Shim; Edgardo T Farinas; Frank Jordan
Journal:  J Mol Catal B Enzym       Date:  2013-12-30

10.  Influence of Organic Solvents on Enzymatic Asymmetric Carboligations.

Authors:  Tina Gerhards; Ursula Mackfeld; Marco Bocola; Eric von Lieres; Wolfgang Wiechert; Martina Pohl; Dörte Rother
Journal:  Adv Synth Catal       Date:  2012-10-04       Impact factor: 5.837

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