Literature DB >> 19485417

Genome mining in Streptomyces avermitilis: A biochemical Baeyer-Villiger reaction and discovery of a new branch of the pentalenolactone family tree.

Jiaoyang Jiang1, Charles N Tetzlaff, Satoshi Takamatsu, Masato Iwatsuki, Mamoru Komatsu, Haruo Ikeda, David E Cane.   

Abstract

Incubation of 1-deoxy-11-oxopentalenic acid (12) with recombinant pan class="Chemical">PtlE protein from Streptomyces avermitilis in the presence of NADPH and catalytic FAD gave the Baeyer-Villiger oxidation product, the previously unknown compound neopentalenolactone D (13), representing a new branch of the pentalenolactone biosynthetic pathway. The structure and stereochemistry of the derived neopentalenolactone D methyl ester (13-Me) were fully assigned by a combination of GC-MS and NMR analysis and confirmed by X-ray crystallography. Neopentalenolactone D (13) was also isolated from engineered cultures of S. avermitilis from which the ptlD gene within the 13.4-kb (neo)-ptl biosynthetic gene cluster had been deleted. The DeltaptlEDeltaptlD double deletion mutant accumulated 12, the substrate for the ptlE gene product, while the corresponding single DeltaptlE mutant produced 12 as well as the related oxidation products 14 and 15. Engineered strains of S. avermitilis, SUKA5 and pKU462::ermRp-ptl cluster, harboring the complete (neo)ptl cluster produced the oxidized lactone 18 and the closely related seco acid hydrolysis products 16 and 17.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19485417      PMCID: PMC2747811          DOI: 10.1021/bi900766w

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  49 in total

1.  Pentalenolactone biosynthesis: Molecular cloning and assignment of biochemical function to PtlF, a short-chain dehydrogenase from Streptomyces avermitilis, and identification of a new biosynthetic intermediate.

Authors:  Zheng You; Satoshi Omura; Haruo Ikeda; David E Cane
Journal:  Arch Biochem Biophys       Date:  2006-11-22       Impact factor: 4.013

2.  Cloning and characterization of a gene cluster for cyclododecanone oxidation in Rhodococcus ruber SC1.

Authors:  K Kostichka; S M Thomas; K J Gibson; V Nagarajan; Q Cheng
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

3.  Pentalenolactone biosynthesis. Molecular cloning and assignment of biochemical function to PtlH, a non-heme iron dioxygenase of Streptomyces avermitilis.

Authors:  Zheng You; Satoshi Omura; Haruo Ikeda; David E Cane
Journal:  J Am Chem Soc       Date:  2006-05-24       Impact factor: 15.419

4.  Substitution of a pentalenolactone-sensitive glyceraldehyde-3-phosphate dehydrogenase by a genetically distinct resistant isoform accompanies pentalenolactone production in Streptomyces arenae.

Authors:  K U Fröhlich; M Wiedmann; F Lottspeich; D Mecke
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

5.  Oxygenase activity in the self-hydroxylation of (s)-2-hydroxypropylphosphonic acid epoxidase involved in fosfomycin biosynthesis.

Authors:  Pinghua Liu; Mark P Mehn; Feng Yan; Zongbao Zhao; Lawrence Que; Hung-wen Liu
Journal:  J Am Chem Soc       Date:  2004-08-25       Impact factor: 15.419

6.  Characterization of two glyceraldehyde-3-phosphate dehydrogenase isoenzymes from the pentalenolactone producer Streptomyces arenae.

Authors:  K H Maurer; F Pfeiffer; H Zehender; D Mecke
Journal:  J Bacteriol       Date:  1983-02       Impact factor: 3.490

7.  Crystal structures of cyclohexanone monooxygenase reveal complex domain movements and a sliding cofactor.

Authors:  I Ahmad Mirza; Brahm J Yachnin; Shaozhao Wang; Stephan Grosse; Hélène Bergeron; Akihiro Imura; Hiroaki Iwaki; Yoshie Hasegawa; Peter C K Lau; Albert M Berghuis
Journal:  J Am Chem Soc       Date:  2009-07-01       Impact factor: 15.419

8.  A new logic for DNA engineering using recombination in Escherichia coli.

Authors:  Y Zhang; F Buchholz; J P Muyrers; A F Stewart
Journal:  Nat Genet       Date:  1998-10       Impact factor: 38.330

9.  Pentalenolactone-insensitive glyceraldehyde-3-phosphate dehydrogenase from Streptomyces arenae is closely related to GAPDH from thermostable eubacteria and plant chloroplasts.

Authors:  K U Fröhlich; R Kannwischer; M Rüdiger; D Mecke
Journal:  Arch Microbiol       Date:  1996-03       Impact factor: 2.552

10.  The structure of pentalenolactone (PA-132).

Authors:  S Takeuchi; Y Ogawa; H Yonehara
Journal:  Tetrahedron Lett       Date:  1969-07       Impact factor: 2.415

View more
  27 in total

Review 1.  Streptomyces and Saccharopolyspora hosts for heterologous expression of secondary metabolite gene clusters.

Authors:  Richard H Baltz
Journal:  J Ind Microbiol Biotechnol       Date:  2010-05-14       Impact factor: 3.346

Review 2.  Genome mining of the Streptomyces avermitilis genome and development of genome-minimized hosts for heterologous expression of biosynthetic gene clusters.

Authors:  Haruo Ikeda; Shin-ya Kazuo; Satoshi Omura
Journal:  J Ind Microbiol Biotechnol       Date:  2013-08-29       Impact factor: 3.346

3.  Genome mining in streptomyces. Discovery of an unprecedented P450-catalyzed oxidative rearrangement that is the final step in the biosynthesis of pentalenolactone.

Authors:  Dongqing Zhu; Myung-Ji Seo; Haruo Ikeda; David E Cane
Journal:  J Am Chem Soc       Date:  2011-02-01       Impact factor: 15.419

Review 4.  Genomic basis for natural product biosynthetic diversity in the actinomycetes.

Authors:  Markus Nett; Haruo Ikeda; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2009-09-01       Impact factor: 13.423

5.  Engineered Streptomyces avermitilis host for heterologous expression of biosynthetic gene cluster for secondary metabolites.

Authors:  Mamoru Komatsu; Kyoko Komatsu; Hanae Koiwai; Yuuki Yamada; Ikuko Kozone; Miho Izumikawa; Junko Hashimoto; Motoki Takagi; Satoshi Omura; Kazuo Shin-ya; David E Cane; Haruo Ikeda
Journal:  ACS Synth Biol       Date:  2013-01-17       Impact factor: 5.110

6.  Biochemical characterization of a novel indole prenyltransferase from Streptomyces sp. SN-593.

Authors:  Shunji Takahashi; Hiroshi Takagi; Atsushi Toyoda; Masakazu Uramoto; Toshihiko Nogawa; Masashi Ueki; Yoshiyuki Sakaki; Hiroyuki Osada
Journal:  J Bacteriol       Date:  2010-03-26       Impact factor: 3.490

Review 7.  Streptomycetes: Surrogate hosts for the genetic manipulation of biosynthetic gene clusters and production of natural products.

Authors:  Keshav K Nepal; Guojun Wang
Journal:  Biotechnol Adv       Date:  2018-10-09       Impact factor: 14.227

8.  Structure-function analyses of cytochrome P450revI involved in reveromycin A biosynthesis and evaluation of the biological activity of its substrate, reveromycin T.

Authors:  Shunji Takahashi; Shingo Nagano; Toshihiko Nogawa; Naoki Kanoh; Masakazu Uramoto; Makoto Kawatani; Takeshi Shimizu; Takeshi Miyazawa; Yoshitsugu Shiro; Hiroyuki Osada
Journal:  J Biol Chem       Date:  2014-09-25       Impact factor: 5.157

9.  Discovery of Two Native Baeyer-Villiger Monooxygenases for Asymmetric Synthesis of Bulky Chiral Sulfoxides.

Authors:  Yan Zhang; Feng Liu; Na Xu; Yin-Qi Wu; Yu-Cong Zheng; Qian Zhao; Guoqiang Lin; Hui-Lei Yu; Jian-He Xu
Journal:  Appl Environ Microbiol       Date:  2018-07-02       Impact factor: 4.792

10.  Product-mediated regulation of pentalenolactone biosynthesis in Streptomyces species by the MarR/SlyA family activators PenR and PntR.

Authors:  Dongqing Zhu; Yinping Wang; Manman Zhang; Haruo Ikeda; Zixin Deng; David E Cane
Journal:  J Bacteriol       Date:  2013-01-11       Impact factor: 3.490

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.