Literature DB >> 19477685

Recent progress in fragment-based lead discovery.

Michèle N Schulz1, Roderick E Hubbard.   

Abstract

Fragment-based methods have emerged as a new strategy for drug discovery. The main advantages are that useful starting points for lead identification for most targets can be identified from a relatively small (typically 1000-member) library of low molecular weight compounds. The main constraints are the need for a method that can reliably detect weak binding and strategies for evolving the fragments into larger lead compounds. The approach has been validated recently as series of compounds from various programs have entered clinical trials. Current new developments are focussing on application of the methods to targets where conventional HTS fails and to integration of fragments alongside HTS for more druggable targets. Here, we provide a brief summary of the key elements of fragment-based lead discovery (FBLD), review recent progress and provide a perspective on the challenges that remain for the field.

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Year:  2009        PMID: 19477685     DOI: 10.1016/j.coph.2009.04.009

Source DB:  PubMed          Journal:  Curr Opin Pharmacol        ISSN: 1471-4892            Impact factor:   5.547


  29 in total

Review 1.  From laptop to benchtop to bedside: structure-based drug design on protein targets.

Authors:  Lu Chen; John K Morrow; Hoang T Tran; Sharangdhar S Phatak; Lei Du-Cuny; Shuxing Zhang
Journal:  Curr Pharm Des       Date:  2012       Impact factor: 3.116

Review 2.  The impact of GPCR structures on pharmacology and structure-based drug design.

Authors:  Miles Congreve; Fiona Marshall
Journal:  Br J Pharmacol       Date:  2009-11-13       Impact factor: 8.739

3.  Fragment Screening by NMR.

Authors:  Ben J Davis
Journal:  Methods Mol Biol       Date:  2021

4.  Translational synthetic chemistry.

Authors:  Sarathy Kesavan; Lisa A Marcaurelle
Journal:  Nat Chem Biol       Date:  2013-04       Impact factor: 15.040

Review 5.  Fragment-based inhibitor discovery against β-lactamase.

Authors:  Derek A Nichols; Adam R Renslo; Yu Chen
Journal:  Future Med Chem       Date:  2014-03       Impact factor: 3.808

6.  Design of a high fragment efficiency library by molecular graph theory.

Authors:  Jennifer Venhorst; Sara Núñez; Chris G Kruse
Journal:  ACS Med Chem Lett       Date:  2010-09-03       Impact factor: 4.345

7.  Missing fragments: detecting cooperative binding in fragment-based drug design.

Authors:  Pramod C Nair; Alpeshkumar K Malde; Nyssa Drinkwater; Alan E Mark
Journal:  ACS Med Chem Lett       Date:  2012-02-14       Impact factor: 4.345

8.  Fragment screening by surface plasmon resonance.

Authors:  Iva Navratilova; Andrew L Hopkins
Journal:  ACS Med Chem Lett       Date:  2010-02-04       Impact factor: 4.345

9.  Visualisation of the chemical space of fragments, lead-like and drug-like molecules in PubChem.

Authors:  Ruud van Deursen; Lorenz C Blum; Jean-Louis Reymond
Journal:  J Comput Aided Mol Des       Date:  2011-05-27       Impact factor: 3.686

10.  Visualisation and subsets of the chemical universe database GDB-13 for virtual screening.

Authors:  Lorenz C Blum; Ruud van Deursen; Jean-Louis Reymond
Journal:  J Comput Aided Mol Des       Date:  2011-05-27       Impact factor: 3.686

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