Literature DB >> 19472181

Origins and evolution of ADAR-mediated RNA editing.

Yongfeng Jin1, Wenjing Zhang, Qi Li.   

Abstract

Adenosine deaminases acting on RNA (ADARs) convert adenosines to inosines in double-stranded RNA in animals. Identification of more ADAR targets and genome sequences of diverse eukaryotes present an opportunity to elucidate the origin and evolution of ADAR-mediated RNA editing. Comparative analysis of the adenosine deaminase family indicates that the first ADAR might have evolved from adenosine deaminases acting on tRNAs after the split of protozoa and metazoa. ADAR1 and ADAR2 arose by gene duplications in early metazoan evolution, approximately 700 million years ago, while ADAR3 and TENR might originate after Urochordata-Vertebrata divergence. More ADAR or ADAR-like genes emerged in some animals (e.g., fish). Considering the constrained structure, ADAR targets are proposed to have evolved from transposable elements and repeats, random selection, and fixation, and intermolecular pairs of sense and antisense RNA. In some degree, increased ADAR-mediated gene regulation should substantially contribute to the emergence and evolution of complex metazoans, particularly the nervous system. (c) 2009 IUBMB.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19472181     DOI: 10.1002/iub.207

Source DB:  PubMed          Journal:  IUBMB Life        ISSN: 1521-6543            Impact factor:   3.885


  43 in total

1.  Cooperative roles of fish protein kinase containing Z-DNA binding domains and double-stranded RNA-dependent protein kinase in interferon-mediated antiviral response.

Authors:  Ting-Kai Liu; Yi-Bing Zhang; Ying Liu; Fan Sun; Jian-Fang Gui
Journal:  J Virol       Date:  2011-09-21       Impact factor: 5.103

Review 2.  When you can't trust the DNA: RNA editing changes transcript sequences.

Authors:  Volker Knoop
Journal:  Cell Mol Life Sci       Date:  2010-10-12       Impact factor: 9.261

Review 3.  Substitutional A-to-I RNA editing.

Authors:  Bjorn-Erik Wulff; Kazuko Nishikura
Journal:  Wiley Interdiscip Rev RNA       Date:  2010 Jul-Aug       Impact factor: 9.957

Review 4.  How do ADARs bind RNA? New protein-RNA structures illuminate substrate recognition by the RNA editing ADARs.

Authors:  Justin M Thomas; Peter A Beal
Journal:  Bioessays       Date:  2017-02-20       Impact factor: 4.345

5.  Transcriptome-wide identification of A > I RNA editing sites by inosine specific cleavage.

Authors:  Pierre B Cattenoz; Ryan J Taft; Eric Westhof; John S Mattick
Journal:  RNA       Date:  2012-12-21       Impact factor: 4.942

6.  A-to-I RNA editing is developmentally regulated and generally adaptive for sexual reproduction in Neurospora crassa.

Authors:  Huiquan Liu; Yang Li; Daipeng Chen; Zhaomei Qi; Qinhu Wang; Jianhua Wang; Cong Jiang; Jin-Rong Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-28       Impact factor: 11.205

Review 7.  Elucidating the inosinome: global approaches to adenosine-to-inosine RNA editing.

Authors:  Bjorn-Erik Wulff; Masayuki Sakurai; Kazuko Nishikura
Journal:  Nat Rev Genet       Date:  2010-12-21       Impact factor: 53.242

8.  Double-stranded RNA adenosine deaminase ADAR-1-induced hypermutated genomes among inactivated seasonal influenza and live attenuated measles virus vaccines.

Authors:  Rodolphe Suspène; Vincent Petit; David Puyraimond-Zemmour; Marie-Ming Aynaud; Michel Henry; Denise Guétard; Christophe Rusniok; Simon Wain-Hobson; Jean-Pierre Vartanian
Journal:  J Virol       Date:  2010-12-15       Impact factor: 5.103

Review 9.  A-to-I editing of coding and non-coding RNAs by ADARs.

Authors:  Kazuko Nishikura
Journal:  Nat Rev Mol Cell Biol       Date:  2015-12-09       Impact factor: 94.444

Review 10.  Role of RNA modifications in brain and behavior.

Authors:  Y Jung; D Goldman
Journal:  Genes Brain Behav       Date:  2018-03       Impact factor: 3.449

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.