Literature DB >> 19471996

Biological characterisation of Haliclona (?gellius) sp.: sponge and associated microorganisms.

Detmer Sipkema1, Bradley Holmes, Scott A Nichols, Harvey W Blanch.   

Abstract

We have characterised the northern Pacific undescribed sponge Haliclona (?gellius) sp. based on rDNA of the sponge and its associated microorganisms. The sponge is closely related to Amphimedon queenslandica from the Great Barrier Reef as the near-complete 18S rDNA sequences of both sponges were identical. The microbial fingerprint of three specimens harvested at different times and of a transplanted specimen was compared to identify stably associated microorganisms. Most bacterial phyla were detected in each sample, but only a few bacterial species were determined to be stably associated with the sponge. A sponge-specific beta- and gamma-Proteobacterium were abundant clones and both of them were present in three of the four specimens analysed. In addition, a Planctomycete and a Crenarchaea were detected in all sponge individuals. Both were closely related to operational taxonomic units that have been found in other sponges, but not exclusively in sponges. Interestingly, also a number of clones that are closely related to intracellular symbionts from insects and amoeba were detected.

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Year:  2009        PMID: 19471996      PMCID: PMC2772955          DOI: 10.1007/s00248-009-9534-8

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  40 in total

1.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.

Authors:  J Castresana
Journal:  Mol Biol Evol       Date:  2000-04       Impact factor: 16.240

2.  Molecular evidence for a uniform microbial community in sponges from different oceans.

Authors:  Ute Hentschel; Jörn Hopke; Matthias Horn; Anja B Friedrich; Michael Wagner; Jörg Hacker; Bradley S Moore
Journal:  Appl Environ Microbiol       Date:  2002-09       Impact factor: 4.792

3.  Diverse microbial communities inhabit Antarctic sponges.

Authors:  Nicole S Webster; Andrew P Negri; Murray M H G Munro; Christopher N Battershill
Journal:  Environ Microbiol       Date:  2004-03       Impact factor: 5.491

4.  Two classes of metabolites from Theonella swinhoei are localized in distinct populations of bacterial symbionts.

Authors:  C A Bewley; N D Holland; D J Faulkner
Journal:  Experientia       Date:  1996-07-15

Review 5.  Marine actinomycete diversity and natural product discovery.

Authors:  Paul R Jensen; Tracy J Mincer; Philip G Williams; William Fenical
Journal:  Antonie Van Leeuwenhoek       Date:  2005-01       Impact factor: 2.271

6.  Archaea in coastal marine environments.

Authors:  E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

7.  Marine sponge Craniella austrialiensis-associated bacterial diversity revelation based on 16S rDNA library and biologically active Actinomycetes screening, phylogenetic analysis.

Authors:  Z-Y Li; Y Liu
Journal:  Lett Appl Microbiol       Date:  2006-10       Impact factor: 2.858

Review 8.  An environmental genomics perspective on the diversity and function of marine sponge-associated microbiota.

Authors:  Lubomir Grozdanov; Ute Hentschel
Journal:  Curr Opin Microbiol       Date:  2007-06-15       Impact factor: 7.934

9.  Genomic analysis reveals chromosomal variation in natural populations of the uncultured psychrophilic archaeon Cenarchaeum symbiosum.

Authors:  C Schleper; E F DeLong; C M Preston; R A Feldman; K Y Wu; R V Swanson
Journal:  J Bacteriol       Date:  1998-10       Impact factor: 3.490

10.  Phylogenetic diversity and spatial distribution of the microbial community associated with the Caribbean deep-water sponge Polymastia cf. corticata by 16S rRNA, aprA, and amoA gene analysis.

Authors:  Birte Meyer; Jan Kuever
Journal:  Microb Ecol       Date:  2008-01-10       Impact factor: 4.552

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  14 in total

1.  Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges.

Authors:  Susanne Schmitt; Peter Tsai; James Bell; Jane Fromont; Micha Ilan; Niels Lindquist; Thierry Perez; Allen Rodrigo; Peter J Schupp; Jean Vacelet; Nicole Webster; Ute Hentschel; Michael W Taylor
Journal:  ISME J       Date:  2011-10-13       Impact factor: 10.302

2.  Pyrosequencing reveals diverse and distinct sponge-specific microbial communities in sponges from a single geographical location in Irish waters.

Authors:  Stephen A Jackson; Jonathan Kennedy; John P Morrissey; Fergal O'Gara; Alan D W Dobson
Journal:  Microb Ecol       Date:  2012-01-28       Impact factor: 4.552

3.  Multiple approaches to enhance the cultivability of bacteria associated with the marine sponge Haliclona (gellius) sp.

Authors:  Detmer Sipkema; Klaske Schippers; Wouter J Maalcke; Yu Yang; Sina Salim; Harvey W Blanch
Journal:  Appl Environ Microbiol       Date:  2011-02-04       Impact factor: 4.792

4.  "Candidatus Defluviella procrastinata" and "Candidatus Cyrtobacter zanobii", two novel ciliate endosymbionts belonging to the "Midichloria clade".

Authors:  Vittorio Boscaro; Giulio Petroni; Alessandro Ristori; Franco Verni; Claudia Vannini
Journal:  Microb Ecol       Date:  2013-01-08       Impact factor: 4.552

5.  A House for Two--Double Bacterial Infection in Euplotes woodruffi Sq1 (Ciliophora, Euplotia) Sampled in Southeastern Brazil.

Authors:  Marcus V X Senra; Roberto J P Dias; Michele Castelli; Inácio D Silva-Neto; Franco Verni; Carlos A G Soares; Giulio Petroni
Journal:  Microb Ecol       Date:  2015-09-17       Impact factor: 4.552

6.  Taxonomic and functional microbial signatures of the endemic marine sponge Arenosclera brasiliensis.

Authors:  Amaro E Trindade-Silva; Cintia Rua; Genivaldo G Z Silva; Bas E Dutilh; Ana Paula B Moreira; Robert A Edwards; Eduardo Hajdu; Gisele Lobo-Hajdu; Ana Tereza Vasconcelos; Roberto G S Berlinck; Fabiano L Thompson
Journal:  PLoS One       Date:  2012-07-02       Impact factor: 3.240

7.  Bacterial Diversity Associated with Cinachyra cavernosa and Haliclona pigmentifera, Cohabiting Sponges in the Coral Reef Ecosystem of Gulf of Mannar, Southeast Coast of India.

Authors:  C Jasmin; Abdulaziz Anas; Shanta Nair
Journal:  PLoS One       Date:  2015-05-04       Impact factor: 3.240

8.  Archaea appear to dominate the microbiome of Inflatella pellicula deep sea sponges.

Authors:  Stephen A Jackson; Burkhardt Flemer; Angela McCann; Jonathan Kennedy; John P Morrissey; Fergal O'Gara; Alan D W Dobson
Journal:  PLoS One       Date:  2013-12-30       Impact factor: 3.240

9.  Isolation and cultivation of fungal strains from in vitro cell cultures of two marine sponges (Porifera: Halichondrida and Haplosclerida).

Authors:  Enrique E Rozas; Rodolpho M Albano; Gisele Lôbo-Hajdu; Werner E G Müller; Heinz-C Schröder; Márcio R Custódio
Journal:  Braz J Microbiol       Date:  2011-12-01       Impact factor: 2.476

10.  Microbial communities in sunken wood are structured by wood-boring bivalves and location in a submarine canyon.

Authors:  Sonja K Fagervold; Chiara Romano; Dimitri Kalenitchenko; Christian Borowski; Amandine Nunes-Jorge; Daniel Martin; Pierre E Galand
Journal:  PLoS One       Date:  2014-05-07       Impact factor: 3.240

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