Literature DB >> 19470485

Sulfur cycling and methanogenesis primarily drive microbial colonization of the highly sulfidic Urania deep hypersaline basin.

Sara Borin1, Lorenzo Brusetti, Francesca Mapelli, Giuseppe D'Auria, Tullio Brusa, Massimo Marzorati, Aurora Rizzi, Michail Yakimov, Danielle Marty, Gert J De Lange, Paul Van der Wielen, Henk Bolhuis, Terry J McGenity, Paraskevi N Polymenakou, Elisa Malinverno, Laura Giuliano, Cesare Corselli, Daniele Daffonchio.   

Abstract

Urania basin in the deep Mediterranean Sea houses a lake that is >100 m deep, devoid of oxygen, 6 times more saline than seawater, and has very high levels of methane and particularly sulfide (up to 16 mM), making it among the most sulfidic water bodies on Earth. Along the depth profile there are 2 chemoclines, a steep one with the overlying oxic seawater, and another between anoxic brines of different density, where gradients of salinity, electron donors and acceptors occur. To identify and differentiate the microbes and processes contributing to the turnover of organic matter and sulfide along the water column, these chemoclines were sampled at a high resolution. Bacterial cell numbers increased up to a hundredfold in the chemoclines as a consequence of elevated nutrient availability, with higher numbers in the upper interface where redox gradient was steeper. Bacterial and archaeal communities, analyzed by DNA fingerprinting, 16S rRNA gene libraries, activity measurements, and cultivation, were highly stratified and metabolically more active along the chemoclines compared with seawater or the uniformly hypersaline brines. Detailed analysis of 16S rRNA gene sequences revealed that in both chemoclines delta- and epsilon-Proteobacteria, predominantly sulfate reducers and sulfur oxidizers, respectively, were the dominant bacteria. In the deepest layers of the basin MSBL1, putatively responsible for methanogenesis, dominated among archaea. The data suggest that the complex microbial community is adapted to the basin's extreme chemistry, and the elevated biomass is driven largely by sulfur cycling and methanogenesis.

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Year:  2009        PMID: 19470485      PMCID: PMC2685740          DOI: 10.1073/pnas.0811984106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes.

Authors:  K Takai; K Horikoshi
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

Review 2.  Life at the oxic-anoxic interface: microbial activities and adaptations.

Authors:  A Brune; P Frenzel; H Cypionka
Journal:  FEMS Microbiol Rev       Date:  2000-12       Impact factor: 16.408

3.  The enigma of prokaryotic life in deep hypersaline anoxic basins.

Authors:  Paul W J J van der Wielen; Henk Bolhuis; Sara Borin; Daniele Daffonchio; Cesare Corselli; Laura Giuliano; Giuseppe D'Auria; Gert J de Lange; Andreas Huebner; Sotirios P Varnavas; John Thomson; Christian Tamburini; Danielle Marty; Terry J McGenity; Kenneth N Timmis
Journal:  Science       Date:  2005-01-07       Impact factor: 47.728

4.  Primary producing prokaryotic communities of brine, interface and seawater above the halocline of deep anoxic lake L'Atalante, Eastern Mediterranean Sea.

Authors:  Michail M Yakimov; Violetta La Cono; Renata Denaro; Giuseppe D'Auria; Franco Decembrini; Kenneth N Timmis; Peter N Golyshin; Laura Giuliano
Journal:  ISME J       Date:  2007-10-04       Impact factor: 10.302

5.  Methanogenesis from Methylated Amines in a Hypersaline Algal Mat.

Authors:  Gary M King
Journal:  Appl Environ Microbiol       Date:  1988-01       Impact factor: 4.792

6.  Unexpected population distribution in a microbial mat community: sulfate-reducing bacteria localized to the highly oxic chemocline in contrast to a eukaryotic preference for anoxia.

Authors:  D Minz; S Fishbain; S J Green; G Muyzer; Y Cohen; B E Rittmann; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

7.  Microbial communities in the chemocline of a hypersaline deep-sea basin (Urania basin, Mediterranean Sea).

Authors:  A M Sass; H Sass; M J Coolen; H Cypionka; J Overmann
Journal:  Appl Environ Microbiol       Date:  2001-12       Impact factor: 4.792

8.  Reclassification of some species of Thiobacillus to the newly designated genera Acidithiobacillus gen. nov., Halothiobacillus gen. nov. and Thermithiobacillus gen. nov.

Authors:  D P Kelly; A P Wood
Journal:  Int J Syst Evol Microbiol       Date:  2000-03       Impact factor: 2.747

Review 9.  The ecology and biotechnology of sulphate-reducing bacteria.

Authors:  Gerard Muyzer; Alfons J M Stams
Journal:  Nat Rev Microbiol       Date:  2008-05-07       Impact factor: 60.633

10.  Stratified prokaryote network in the oxic-anoxic transition of a deep-sea halocline.

Authors:  Daniele Daffonchio; Sara Borin; Tullio Brusa; Lorenzo Brusetti; Paul W J J van der Wielen; Henk Bolhuis; Michail M Yakimov; Giuseppe D'Auria; Laura Giuliano; Danielle Marty; Christian Tamburini; Terry J McGenity; John E Hallsworth; Andrea M Sass; Kenneth N Timmis; Anastasios Tselepides; Gert J de Lange; Andreas Hübner; John Thomson; Soterios P Varnavas; Francesco Gasparoni; Hans W Gerber; Elisa Malinverno; Cesare Corselli; Jean Garcin; Boyd McKew; Peter N Golyshin; Nikolaos Lampadariou; Paraskevi Polymenakou; Daniele Calore; Stefano Cenedese; Fabio Zanon; Sven Hoog
Journal:  Nature       Date:  2006-03-09       Impact factor: 49.962

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  30 in total

1.  Unveiling microbial activities along the halocline of Thetis, a deep-sea hypersaline anoxic basin.

Authors:  Maria G Pachiadaki; Michail M Yakimov; Violetta LaCono; Edward Leadbetter; Virginia Edgcomb
Journal:  ISME J       Date:  2014-06-20       Impact factor: 10.302

2.  Inter-comparison of the potentially active prokaryotic communities in the halocline sediments of Mediterranean deep-sea hypersaline basins.

Authors:  Konstantinos A Kormas; Maria G Pachiadaki; Hera Karayanni; Edward R Leadbetter; Joan M Bernhard; Virginia P Edgcomb
Journal:  Extremophiles       Date:  2015-07-16       Impact factor: 2.395

3.  Marine microorganisms as source of stereoselective esterases and ketoreductases: kinetic resolution of a prostaglandin intermediate.

Authors:  Valerio De Vitis; Benedetta Guidi; Martina Letizia Contente; Tiziana Granato; Paola Conti; Francesco Molinari; Elena Crotti; Francesca Mapelli; Sara Borin; Daniele Daffonchio; Diego Romano
Journal:  Mar Biotechnol (NY)       Date:  2014-09-30       Impact factor: 3.619

4.  In silico description of cobalt and nickel assimilation systems in the genomes of methanogens.

Authors:  P Chellapandi
Journal:  Syst Synth Biol       Date:  2011-10-15

5.  Comparison and characterization of microbial communities in sulfide-rich wastewater with and without propidium monoazide treatment.

Authors:  Wei-Tie Lin; Jian-Fei Luo; Yong Guo
Journal:  Curr Microbiol       Date:  2010-08-03       Impact factor: 2.188

6.  Life on the edge: active microbial communities in the Kryos MgCl2-brine basin at very low water activity.

Authors:  Lea Steinle; Katrin Knittel; Nicole Felber; Claudia Casalino; Gert de Lange; Chiara Tessarolo; Alina Stadnitskaia; Jaap S Sinninghe Damsté; Jakob Zopfi; Moritz F Lehmann; Tina Treude; Helge Niemann
Journal:  ISME J       Date:  2018-04-17       Impact factor: 10.302

7.  Extracellular DNA can preserve the genetic signatures of present and past viral infection events in deep hypersaline anoxic basins.

Authors:  C Corinaldesi; M Tangherlini; G M Luna; A Dell'anno
Journal:  Proc Biol Sci       Date:  2014-02-12       Impact factor: 5.349

8.  Deep-sea biodiversity in the Mediterranean Sea: the known, the unknown, and the unknowable.

Authors:  Roberto Danovaro; Joan Batista Company; Cinzia Corinaldesi; Gianfranco D'Onghia; Bella Galil; Cristina Gambi; Andrew J Gooday; Nikolaos Lampadariou; Gian Marco Luna; Caterina Morigi; Karine Olu; Paraskevi Polymenakou; Eva Ramirez-Llodra; Anna Sabbatini; Francesc Sardà; Myriam Sibuet; Anastasios Tselepides
Journal:  PLoS One       Date:  2010-08-02       Impact factor: 3.240

9.  Anammox bacterial populations in deep marine hypersaline gradient systems.

Authors:  Sara Borin; Francesca Mapelli; Eleonora Rolli; Bongkeun Song; Craig Tobias; Markus C Schmid; Gert J De Lange; Gert J Reichart; Stefan Schouten; Mike Jetten; Daniele Daffonchio
Journal:  Extremophiles       Date:  2013-01-23       Impact factor: 2.395

10.  Gene expression profiling of microbial activities and interactions in sediments under haloclines of E. Mediterranean deep hypersaline anoxic basins.

Authors:  Virginia P Edgcomb; Maria G Pachiadaki; Paraskevi Mara; Konstantinos A Kormas; Edward R Leadbetter; Joan M Bernhard
Journal:  ISME J       Date:  2016-04-19       Impact factor: 10.302

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