Literature DB >> 19465064

Rapid detection of point mutations in Plasmodium falciparum genes associated with antimalarial drugs resistance by using High-Resolution Melting analysis.

Valérie Andriantsoanirina1, Vincent Lascombes, Arsène Ratsimbasoa, Christiane Bouchier, Jonathan Hoffman, Magali Tichit, Leon-Paul Rabarijaona, Rémy Durand, Didier Ménard.   

Abstract

We have developed a High-Resolution DNA Melting method to detect mutations related to Plasmodium falciparum resistance. This method is based on real-time PCR followed by High Resolution Melting ramping from 67 degrees C to 80 degrees C with fluorescence data acquisition set at 0.1 degrees C increments. The accuracy of the technique was assessed using 177 P. falciparum clinical isolates and two reference strains. Results perfectly matched those obtained by DNA sequencing for some important genetic markers of P. falciparum resistance. This technique could be of great value for epidemiological studies, especially in developing countries.

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Year:  2009        PMID: 19465064     DOI: 10.1016/j.mimet.2009.05.013

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  14 in total

1.  Multiple Single-Nucleotide Polymorphism Detection for Antimalarial Pyrimethamine Resistance via Allele-Specific PCR Coupled with Gold Nanoparticle-Based Lateral Flow Biosensor.

Authors:  Tingting Jiang; Yan Huang; Weijia Cheng; Yifei Sun; Wei Wei; Kai Wu; Chen Shen; Xiaolong Fu; Haifeng Dong; Jian Li
Journal:  Antimicrob Agents Chemother       Date:  2021-02-17       Impact factor: 5.191

2.  Rapid, field-deployable method for genotyping and discovery of single-nucleotide polymorphisms associated with drug resistance in Plasmodium falciparum.

Authors:  Rachel Daniels; Daouda Ndiaye; Mikeal Wall; Jason McKinney; Papa Diogoye Séne; Pardis C Sabeti; Sarah K Volkman; Souleymane Mboup; Dyann F Wirth
Journal:  Antimicrob Agents Chemother       Date:  2012-03-19       Impact factor: 5.191

3.  High resolution melting technique for molecular epidemiological studies of cystic echinococcosis: differentiating G1, G3, and G6 genotypes of Echinococcus granulosus sensu lato.

Authors:  Sima Rostami; Saeed Talebi; Zahra Babaei; Mitra Sharbatkhori; Naser Ziaali; Habib Rostami; Majid Fasihi Harandi
Journal:  Parasitol Res       Date:  2013-07-07       Impact factor: 2.289

4.  Development of high-resolution melting (HRM) analysis for population studies of Fascioloides magna (Trematoda: Fasciolidae), the giant liver fluke of ruminants.

Authors:  Ján Radvánský; Eva Bazsalovicsová; Ivica Králová-Hromadová; Gabriel Minárik; Ludevít Kádaši
Journal:  Parasitol Res       Date:  2010-10-22       Impact factor: 2.289

5.  High-throughput genotyping of single nucleotide polymorphisms in the Plasmodium falciparum dhfr gene by asymmetric PCR and melt-curve analysis.

Authors:  Rochelle E Cruz; Sandra E Shokoples; Dammika P Manage; Stephanie K Yanow
Journal:  J Clin Microbiol       Date:  2010-07-14       Impact factor: 5.948

6.  Rapid identification of chloroquine and atovaquone drug resistance in Plasmodium falciparum using high-resolution melt polymerase chain reaction.

Authors:  Linda Seo Hwee Gan; Jin Phang Loh
Journal:  Malar J       Date:  2010-05-21       Impact factor: 2.979

Review 7.  Application of genomics to field investigations of malaria by the international centers of excellence for malaria research.

Authors:  Sarah K Volkman; Daouda Ndiaye; Mahamadou Diakite; Ousmane A Koita; Davis Nwakanma; Rachel F Daniels; Daniel J Park; Daniel E Neafsey; Marc A T Muskavitch; Donald J Krogstad; Pardis C Sabeti; Daniel L Hartl; Dyann F Wirth
Journal:  Acta Trop       Date:  2011-12-13       Impact factor: 3.112

8.  Artesunate-amodiaquine and artemether-lumefantrine for the treatment of uncomplicated falciparum malaria in Liberia: in vivo efficacy and frequency of molecular markers.

Authors:  Victor S Koko; Marian Warsame; Benjamin Vonhm; Moses K Jeuronlon; Didier Menard; Laurence Ma; Fahn Taweh; Lekilay Tehmeh; Paye Nyansaiye; Oliver J Pratt; Sei Parwon; Patrick Kamara; Magnus Asinya; Aaron Kollie; Pascal Ringwald
Journal:  Malar J       Date:  2022-04-27       Impact factor: 3.469

9.  Rapid detection and identification of human hookworm infections through high resolution melting (HRM) analysis.

Authors:  Romano Ngui; Yvonne A L Lim; Kek Heng Chua
Journal:  PLoS One       Date:  2012-07-26       Impact factor: 3.240

10.  Population Genetics, Evolutionary Genomics, and Genome-Wide Studies of Malaria: A View Across the International Centers of Excellence for Malaria Research.

Authors:  Jane M Carlton; Sarah K Volkman; Swapna Uplekar; Daniel N Hupalo; João Marcelo Pereira Alves; Liwang Cui; Martin Donnelly; David S Roos; Omar S Harb; Monica Acosta; Andrew Read; Paulo E M Ribolla; Om P Singh; Neena Valecha; Samuel C Wassmer; Marcelo Ferreira; Ananias A Escalante
Journal:  Am J Trop Med Hyg       Date:  2015-08-10       Impact factor: 2.345

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