Literature DB >> 19456267

Exploring the effect of sex on empirical fitness landscapes.

J Arjan G M de Visser1, Su-Chan Park, Joachim Krug.   

Abstract

The nature of epistasis has important consequences for the evolutionary significance of sex and recombination. Recent efforts to find negative epistasis as a source of negative linkage disequilibrium and associated long-term advantage to sex have yielded little support. Sign epistasis, where the sign of the fitness effects of alleles varies across genetic backgrounds, is responsible for the ruggedness of the fitness landscape, with several unexplored implications for the evolution of sex. Here, we describe fitness landscapes for two sets of strains of the asexual fungus Aspergillus niger involving all combinations of five mutations. We find that approximately 30% of the single-mutation fitness effects are positive despite their negative effect in the wild-type strain and that several local fitness maxima and minima are present. We then compare adaptation of sexual and asexual populations on these empirical fitness landscapes by using simulations. The results show a general disadvantage of sex on these rugged landscapes, caused by the breakdown by recombination of genotypes on fitness peaks. Sex facilitates movement to the global peak only for some parameter values on one landscape, indicating its dependence on the landscape's topography. We discuss possible reasons for the discrepancy between our results and the reports of faster adaptation of sexual populations.

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Year:  2009        PMID: 19456267     DOI: 10.1086/599081

Source DB:  PubMed          Journal:  Am Nat        ISSN: 0003-0147            Impact factor:   3.926


  56 in total

1.  Bistability in two-locus models with selection, mutation, and recombination.

Authors:  Su-Chan Park; Joachim Krug
Journal:  J Math Biol       Date:  2010-07-09       Impact factor: 2.259

2.  Breaking evolutionary constraint with a tradeoff ratchet.

Authors:  Marjon G J de Vos; Alexandre Dawid; Vanda Sunderlikova; Sander J Tans
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-13       Impact factor: 11.205

3.  Diminishing returns from beneficial mutations and pervasive epistasis shape the fitness landscape for rifampicin resistance in Pseudomonas aeruginosa.

Authors:  R C MacLean; G G Perron; A Gardner
Journal:  Genetics       Date:  2010-09-27       Impact factor: 4.562

4.  Rate of adaptation in sexuals and asexuals: a solvable model of the Fisher-Muller effect.

Authors:  Su-Chan Park; Joachim Krug
Journal:  Genetics       Date:  2013-08-26       Impact factor: 4.562

5.  Nonlinear fitness landscape of a molecular pathway.

Authors:  Lilia Perfeito; Stéphane Ghozzi; Johannes Berg; Karin Schnetz; Michael Lässig
Journal:  PLoS Genet       Date:  2011-07-21       Impact factor: 5.917

6.  The Valley-of-Death: reciprocal sign epistasis constrains adaptive trajectories in a constant, nutrient limiting environment.

Authors:  Kami E Chiotti; Daniel J Kvitek; Karen H Schmidt; Gregory Koniges; Katja Schwartz; Elizabeth A Donckels; Frank Rosenzweig; Gavin Sherlock
Journal:  Genomics       Date:  2014-11-01       Impact factor: 5.736

7.  A tortoise-hare pattern seen in adapting structured and unstructured populations suggests a rugged fitness landscape in bacteria.

Authors:  Joshua R Nahum; Peter Godfrey-Smith; Brittany N Harding; Joseph H Marcus; Jared Carlson-Stevermer; Benjamin Kerr
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

8.  Repeatability of adaptation in experimental populations of different sizes.

Authors:  Josianne Lachapelle; Joshua Reid; Nick Colegrave
Journal:  Proc Biol Sci       Date:  2015-04-22       Impact factor: 5.349

9.  Predicting the evolution of sex on complex fitness landscapes.

Authors:  Dusan Misevic; Roger D Kouyos; Sebastian Bonhoeffer
Journal:  PLoS Comput Biol       Date:  2009-09-18       Impact factor: 4.475

10.  The impact of population size on the evolution of asexual microbes on smooth versus rugged fitness landscapes.

Authors:  Andreas Handel; Daniel E Rozen
Journal:  BMC Evol Biol       Date:  2009-09-18       Impact factor: 3.260

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