Literature DB >> 19450689

The Hermes transposon of Musca domestica and its use as a mutagen of Schizosaccharomyces pombe.

Jung M Park1, Adam G Evertts, Henry L Levin.   

Abstract

Transposon mutagenesis allows for the discovery and characterization of genes by creating mutations that can be easily mapped and sequenced. Moreover, this method allows for a relatively unbiased approach to isolating genes of interest. Recently, a system of transposon based mutagenesis for Schizosaccharomyces pombe became available. This mutagenesis relies on Hermes, a DNA transposon from the house fly that readily integrates into the chromosomes of S. pombe. The Hermes system is distinct from the retrotransposons of S. pombe because it efficiently integrates into open reading frames. To mutagenize S. pombe, cells are transformed with a plasmid that contains a drug resistance marker flanked by the terminal inverted repeats of Hermes. The Hermes transposase expressed from a second plasmid excises the resistance marker with the inverted repeats and inserts this DNA into chromosomal sites. After S. pombe with these two plasmids grow 25 generations, approximately 2% of the cells contain insertions. Of the cells with insertions, 68% contain single integration events. The protocols listed here provide the detailed information necessary to mutagenize a strain of interest, screen for specific phenotypes, and sequence the positions of insertion.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19450689      PMCID: PMC2782614          DOI: 10.1016/j.ymeth.2009.05.004

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  12 in total

Review 1.  Targeting survival: integration site selection by retroviruses and LTR-retrotransposons.

Authors:  Frederic D Bushman
Journal:  Cell       Date:  2003-10-17       Impact factor: 41.582

Review 2.  Integration by design.

Authors:  Suzanne Sandmeyer
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-05       Impact factor: 11.205

3.  Phosphorylation regulates integration of the yeast Ty5 retrotransposon into heterochromatin.

Authors:  Junbiao Dai; Weiwu Xie; Troy L Brady; Jiquan Gao; Daniel F Voytas
Journal:  Mol Cell       Date:  2007-07-20       Impact factor: 17.970

Review 4.  P-element mutagenesis.

Authors:  Thomas Hummel; Christian Klämbt
Journal:  Methods Mol Biol       Date:  2008

5.  Large-scale analysis of the yeast genome by transposon tagging and gene disruption.

Authors:  P Ross-Macdonald; P S Coelho; T Roemer; S Agarwal; A Kumar; R Jansen; K H Cheung; A Sheehan; D Symoniatis; L Umansky; M Heidtman; F K Nelson; H Iwasaki; K Hager; M Gerstein; P Miller; G S Roeder; M Snyder
Journal:  Nature       Date:  1999-11-25       Impact factor: 49.962

6.  Comparison of Schizosaccharomyces pombe expression systems.

Authors:  S L Forsburg
Journal:  Nucleic Acids Res       Date:  1993-06-25       Impact factor: 16.971

7.  Mos1-mediated insertional mutagenesis in Caenorhabditis elegans.

Authors:  Thomas Boulin; Jean-Louis Bessereau
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

8.  A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac.

Authors:  Stephen T Thibault; Matthew A Singer; Wesley Y Miyazaki; Brett Milash; Nicholas A Dompe; Carol M Singh; Ross Buchholz; Madelyn Demsky; Robert Fawcett; Helen L Francis-Lang; Lisa Ryner; Lai Man Cheung; Angela Chong; Cathy Erickson; William W Fisher; Kimberly Greer; Stephanie R Hartouni; Elizabeth Howie; Lakshmi Jakkula; Daniel Joo; Keith Killpack; Alex Laufer; Julie Mazzotta; Ronald D Smith; Lynn M Stevens; Christiana Stuber; Lory R Tan; Richard Ventura; Alesa Woo; Irena Zakrajsek; Lora Zhao; Feng Chen; Candace Swimmer; Casey Kopczynski; Geoffrey Duyk; Margaret L Winberg; Jonathan Margolis
Journal:  Nat Genet       Date:  2004-02-22       Impact factor: 38.330

9.  The carnegie protein trap library: a versatile tool for Drosophila developmental studies.

Authors:  Michael Buszczak; Shelley Paterno; Daniel Lighthouse; Julia Bachman; Jamie Planck; Stephenie Owen; Andrew D Skora; Todd G Nystul; Benjamin Ohlstein; Anna Allen; James E Wilhelm; Terence D Murphy; Robert W Levis; Erika Matunis; Nahathai Srivali; Roger A Hoskins; Allan C Spradling
Journal:  Genetics       Date:  2006-12-28       Impact factor: 4.562

Review 10.  Technology transfer from worms and flies to vertebrates: transposition-based genome manipulations and their future perspectives.

Authors:  Lajos Mátés; Zsuzsanna Izsvák; Zoltán Ivics
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

View more
  10 in total

1.  Glycan Alteration Imparts Cellular Resistance to a Membrane-Lytic Anticancer Peptide.

Authors:  Ken Ishikawa; Scott H Medina; Joel P Schneider; Amar J S Klar
Journal:  Cell Chem Biol       Date:  2017-01-12       Impact factor: 8.116

2.  Integration profiling of gene function with dense maps of transposon integration.

Authors:  Yabin Guo; Jung Min Park; Bowen Cui; Elizabeth Humes; Sunil Gangadharan; Stevephen Hung; Peter C FitzGerald; Kwang-Lae Hoe; Shiv I S Grewal; Nancy L Craig; Henry L Levin
Journal:  Genetics       Date:  2013-07-26       Impact factor: 4.562

3.  DNA transposon Hermes inserts into DNA in nucleosome-free regions in vivo.

Authors:  Sunil Gangadharan; Loris Mularoni; Jennifer Fain-Thornton; Sarah J Wheelan; Nancy L Craig
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-03       Impact factor: 11.205

4.  A piggyBac transposon-based mutagenesis system for the fission yeast Schizosaccharomyces pombe.

Authors:  Jun Li; Jia-Min Zhang; Xin Li; Fang Suo; Mei-Jun Zhang; Wenru Hou; Jinghua Han; Li-Lin Du
Journal:  Nucleic Acids Res       Date:  2011-01-18       Impact factor: 16.971

5.  The Paf1 complex factors Leo1 and Paf1 promote local histone turnover to modulate chromatin states in fission yeast.

Authors:  Laia Sadeghi; Punit Prasad; Karl Ekwall; Amikam Cohen; J Peter Svensson
Journal:  EMBO Rep       Date:  2015-10-29       Impact factor: 8.807

6.  Fitness Landscape of the Fission Yeast Genome.

Authors:  Leanne Grech; Daniel C Jeffares; Christoph Y Sadée; María Rodríguez-López; Danny A Bitton; Mimoza Hoti; Carolina Biagosch; Dimitra Aravani; Maarten Speekenbrink; Christopher J R Illingworth; Philipp H Schiffer; Alison L Pidoux; Pin Tong; Victor A Tallada; Robin Allshire; Henry L Levin; Jürg Bähler
Journal:  Mol Biol Evol       Date:  2019-08-01       Impact factor: 16.240

7.  Comparing the utility of in vivo transposon mutagenesis approaches in yeast species to infer gene essentiality.

Authors:  Anton Levitan; Andrew N Gale; Emma K Dallon; Darby W Kozan; Kyle W Cunningham; Roded Sharan; Judith Berman
Journal:  Curr Genet       Date:  2020-07-17       Impact factor: 3.886

Review 8.  An Ancient Yeast for Young Geneticists: A Primer on the Schizosaccharomyces pombe Model System.

Authors:  Charles S Hoffman; Valerie Wood; Peter A Fantes
Journal:  Genetics       Date:  2015-10       Impact factor: 4.562

9.  Serial number tagging reveals a prominent sequence preference of retrotransposon integration.

Authors:  Atreyi Ghatak Chatterjee; Caroline Esnault; Yabin Guo; Stevephen Hung; Philip G McQueen; Henry L Levin
Journal:  Nucleic Acids Res       Date:  2014-06-19       Impact factor: 16.971

10.  Genome-wide screens in yeast models towards understanding chronological lifespan regulation.

Authors:  Luc Legon; Charalampos Rallis
Journal:  Brief Funct Genomics       Date:  2022-01-25       Impact factor: 4.241

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.