Literature DB >> 19450492

Kinetic folding mechanism of erythropoietin.

Douglas D Banks1, Joanna L Scavezze, Christine C Siska.   

Abstract

This report describes what to our knowledge is the first kinetic folding studies of erythropoietin, a glycosylated four-helical bundle cytokine responsible for the regulation of red blood cell production. Kinetic responses for folding and unfolding reactions initiated by manual mixing were monitored by far-ultraviolet circular dichroism and fluorescence spectroscopy, and folding reactions initiated by stopped-flow mixing were monitored by fluorescence. The urea concentration dependence of the observed kinetics were best described by a three-state model with a transiently populated intermediate species that is on-pathway and obligatory. This folding scheme was further supported by the excellent agreement between the free energy of unfolding and m-value calculated from the microscopic rate constants derived from this model and these parameters determined from separate equilibrium unfolding experiments. Compared to the kinetics of other members of the four-helical bundle cytokine family, erythropoietin folding and unfolding reactions were slower and less susceptible to aggregation. We tentatively attribute these slower rates and protection from association events to the large amount of carbohydrate attached to erythropoietin at four sites.

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Year:  2009        PMID: 19450492      PMCID: PMC2712195          DOI: 10.1016/j.bpj.2009.02.049

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  29 in total

1.  Influence of the carbohydrate moiety on the stability of glycoproteins.

Authors:  C Wang; M Eufemi; C Turano; A Giartosio
Journal:  Biochemistry       Date:  1996-06-11       Impact factor: 3.162

Review 2.  How do small single-domain proteins fold?

Authors:  S E Jackson
Journal:  Fold Des       Date:  1998

3.  Conformational influences of glycosylation of a peptide: a possible model for the effect of glycosylation on the rate of protein folding.

Authors:  D H Live; R A Kumar; X Beebe; S J Danishefsky
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-12       Impact factor: 11.205

4.  Transient aggregates in protein folding are easily mistaken for folding intermediates.

Authors:  M Silow; M Oliveberg
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-10       Impact factor: 11.205

5.  Glycosylation and thermodynamic versus kinetic stability of horseradish peroxidase.

Authors:  J W Tams; K G Welinder
Journal:  FEBS Lett       Date:  1998-01-16       Impact factor: 4.124

6.  Kinetic analysis of the folding of human growth hormone. Influence of disulfide bonds.

Authors:  K M Youngman; D B Spencer; D N Brems; M R DeFelippis
Journal:  J Biol Chem       Date:  1995-08-25       Impact factor: 5.157

7.  Probing the folding mechanism of a leucine zipper peptide by stopped-flow circular dichroism spectroscopy.

Authors:  J A Zitzewitz; O Bilsel; J Luo; B E Jones; C R Matthews
Journal:  Biochemistry       Date:  1995-10-03       Impact factor: 3.162

8.  NMR structure of human erythropoietin and a comparison with its receptor bound conformation.

Authors:  J C Cheetham; D M Smith; K H Aoki; J L Stevenson; T J Hoeffel; R S Syed; J Egrie; T S Harvey
Journal:  Nat Struct Biol       Date:  1998-10

9.  Differentiation of the local structure around tryptophan 51 and 64 in recombinant human erythropoietin by tryptophan phosphorescence.

Authors:  Bruce A Kerwin; Kenneth H Aoki; Margherita Gonelli; Giovanni B Strambini
Journal:  Photochem Photobiol       Date:  2008-03-07       Impact factor: 3.421

10.  The effect of carbohydrate on the structure and stability of erythropoietin.

Authors:  L O Narhi; T Arakawa; K H Aoki; R Elmore; M F Rohde; T Boone; T W Strickland
Journal:  J Biol Chem       Date:  1991-12-05       Impact factor: 5.157

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  2 in total

1.  Nonspecific shielding of unfavorable electrostatic intramolecular interactions in the erythropoietin native-state increase conformational stability and limit non-native aggregation.

Authors:  Douglas D Banks
Journal:  Protein Sci       Date:  2015-04-11       Impact factor: 6.725

2.  Improved drug-like properties of therapeutic proteins by directed evolution.

Authors:  Andrew Buchanan; Franco Ferraro; Steven Rust; Sudharsan Sridharan; Ruth Franks; Greg Dean; Matthew McCourt; Lutz Jermutus; Ralph Minter
Journal:  Protein Eng Des Sel       Date:  2012-08-31       Impact factor: 1.650

  2 in total

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