Literature DB >> 19437706

Contributions of phosphate to DNA adsorption/desorption behaviors on aminosilane-modified magnetic nanoparticles.

Tsuyoshi Tanaka1, Ririko Sakai, Ryosuke Kobayashi, Keiichi Hatakeyama, Tadashi Matsunaga.   

Abstract

The adsorption and desorption behaviors of DNA on aminosilane-modified magnetic nanoparticles were investigated by altering both type of anions and solvation state to achieve eficient recovery of DNA useful for subsequent polymerase chain reaction (PCR) analysis. The effects of multiple anions in accordance with the Hofmeister ion series were determined to clarify the contribution of phosphate ions on the effective desorption of DNA from aminosilane surfaces. Efficient DNA desorption (85% recovery) occurred in the presence of 1 M phosphate buffer, however, little DNA desorption was observed using any other anions. This phenomenon indicates that desorption originated from the replacement of DNA by phosphate ions. Furthermore, the adsorption and desorption were significantly affected by the addition of both protic and aprotic solvents. Efficient recovery of adsorbed DNA was attained using deoxynucleotide triphosphates (dNTPs) in place of phosphate buffer and was suitable for subsequent PCR analyses. Therefore, the DNA adsorption/desorption process proposed in this study will be a promising, novel approach for DNA purification with a high recovery ratio that is suitable for subsequent enzymatic reactions, such as PCR or restriction enzyme digestion.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19437706     DOI: 10.1021/la8032397

Source DB:  PubMed          Journal:  Langmuir        ISSN: 0743-7463            Impact factor:   3.882


  14 in total

1.  Enhanced cellular uptake of aminosilane-coated superparamagnetic iron oxide nanoparticles in mammalian cell lines.

Authors:  Xiao-Ming Zhu; Yi-Xiang J Wang; Ken Cham-Fai Leung; Siu-Fung Lee; Feng Zhao; Da-Wei Wang; Josie M Y Lai; Chao Wan; Christopher H K Cheng; Anil T Ahuja
Journal:  Int J Nanomedicine       Date:  2012-02-21

2.  A modular method for the extraction of DNA and RNA, and the separation of DNA pools from diverse environmental sample types.

Authors:  Mark A Lever; Andrea Torti; Philip Eickenbusch; Alexander B Michaud; Tina Šantl-Temkiv; Bo Barker Jørgensen
Journal:  Front Microbiol       Date:  2015-05-19       Impact factor: 5.640

Review 3.  Recent advances in superparamagnetic iron oxide nanoparticles for cellular imaging and targeted therapy research.

Authors:  Yi-Xiang J Wang; Shouhu Xuan; Marc Port; Jean-Marc Idee
Journal:  Curr Pharm Des       Date:  2013       Impact factor: 3.116

4.  Extraction of human genomic DNA from whole blood using a magnetic microsphere method.

Authors:  Rui Gong; Shengying Li
Journal:  Int J Nanomedicine       Date:  2014-08-08

5.  Size-selective separation of DNA fragments by using lysine-functionalized silica particles.

Authors:  Lingling Liu; Zilong Guo; Zhenzhen Huang; Jiaqi Zhuang; Wensheng Yang
Journal:  Sci Rep       Date:  2016-02-25       Impact factor: 4.379

6.  Non-selective Separation of Bacterial Cells with Magnetic Nanoparticles Facilitated by Varying Surface Charge.

Authors:  Xin-Lei Gao; Ming-Fei Shao; Yi-Sheng Xu; Yi Luo; Kai Zhang; Feng Ouyang; Ji Li
Journal:  Front Microbiol       Date:  2016-12-01       Impact factor: 5.640

7.  A Simple and Efficient RNA Extraction Method from Deep-Sea Hydrothermal Vent Chimney Structures.

Authors:  Hisashi Muto; Yoshihiro Takaki; Miho Hirai; Sayaka Mino; Shigeki Sawayama; Ken Takai; Satoshi Nakagawa
Journal:  Microbes Environ       Date:  2017-11-30       Impact factor: 2.912

8.  A sonochemical approach to the direct surface functionalization of superparamagnetic iron oxide nanoparticles with (3-aminopropyl)triethoxysilane.

Authors:  Bashiru Kayode Sodipo; Azlan Abdul Aziz
Journal:  Beilstein J Nanotechnol       Date:  2014-09-08       Impact factor: 3.649

9.  Improved yield of high molecular weight DNA coincides with increased microbial diversity access from iron oxide cemented sub-surface clay environments.

Authors:  Richard A Hurt; Michael S Robeson; Migun Shakya; James G Moberly; Tatiana A Vishnivetskaya; Baohua Gu; Dwayne A Elias
Journal:  PLoS One       Date:  2014-07-17       Impact factor: 3.240

10.  Genomic Variations in Probiotic Lactobacillus plantarum P-8 in the Human and Rat Gut.

Authors:  Yuqin Song; Qiuwen He; Jiachao Zhang; Jianmin Qiao; Haiyan Xu; Zhi Zhong; Wenyi Zhang; Zhihong Sun; Ruifu Yang; Yujun Cui; Heping Zhang
Journal:  Front Microbiol       Date:  2018-05-08       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.