Literature DB >> 19431801

Redshift of the purple membrane absorption band and the deprotonation of tyrosine residues at high pH: Origin of the parallel photocycles of trans-bacteriorhodopsin.

S P Balashov1, R Govindjee, T G Ebrey.   

Abstract

At high pH (> 8) the 570 nm absorption band of all-trans bacteriorhodopsin (bR) in purple membrane undergoes a small (1.5 nm) shift to longer wavelengths, which causes a maximal increase in absorption at 615 nm. The pK of the shift is 9.0 in the presence of 167 mM KCl, and its intrinsic pK is approximately 8.3. The red shift of the trans-bR absorption spectrum correlates with the appearance of the fast component in the light-induced L to M transition, and absorption increases at 238 and 297 nm which are apparently caused by the deprotonation of a tyrosine residue and red shift of the absorption of tryptophan residues. This suggests that the deprotonation of a tyrosine residue with an exceptionally low pK (pK(a) approximately 8.3) is responsible for the absorption shift of the chromophore band and fast M formation. The pH and salt dependent equilibrium between the two forms of bR, "neutral" and "alkaline," bR <--> bR(a), results in two parallel photocycles of trans-bR at high pH, differing in the rate of the L to M transition. In the pH range 10-11.8 deprotonation of two more tyrosine residues is observed with pK's approximately 10.3 and 11.3 (in 167 mM KCL). Two simple models discussing the role of the pH induced tyrosine deprotonation in the photocycle and proton pumping are presented.It is suggested that the shifts of the absorption bands at high pH are due to the appearance of a negatively charged group inside the protein (tyrosinate) which causes electrochromic shifts of the chromophore and protein absorption bands due to the interaction with the dipole moments in the ground and excited states of bR (Stark effect). This effect gives evidence for a significant change in the dipole moment of the chromophore of bR upon excitation.Under illumination alkaline bR forms, besides the usual photocycle intermediates, a long-lived species with absorption maximum at 500 nm (P500). P500 slowly converts into bR(a) in the dark. Upon illumination P500 is transformed into an intermediate having an absorption maximum at 380 nm (P380). P380 can be reconverted to P500 by blue light illumination or by incubation in the dark.

Entities:  

Year:  1991        PMID: 19431801      PMCID: PMC1260085          DOI: 10.1016/S0006-3495(91)82074-4

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  42 in total

1.  Octopus photoreceptor membranes. Surface charge density and pK of the Schiff base of the pigments.

Authors:  Y Koutalos; T G Ebrey; H R Gilson; B Honig
Journal:  Biophys J       Date:  1990-08       Impact factor: 4.033

2.  The role of back-reactions and proton uptake during the N----O transition in bacteriorhodopsin's photocycle: a kinetic resonance Raman study.

Authors:  J B Ames; R A Mathies
Journal:  Biochemistry       Date:  1990-08-07       Impact factor: 3.162

3.  Bacteriorhodopsin mutants of Halobacterium sp. GRB. II. Characterization of mutants.

Authors:  J Soppa; J Otomo; J Straub; J Tittor; S Meessen; D Oesterhelt
Journal:  J Biol Chem       Date:  1989-08-05       Impact factor: 5.157

4.  Pathways of the rise and decay of the M photointermediate(s) of bacteriorhodopsin.

Authors:  G Váró; J K Lanyi
Journal:  Biochemistry       Date:  1990-03-06       Impact factor: 3.162

5.  Conserved amino acids in F-helix of bacteriorhodopsin form part of a retinal binding pocket.

Authors:  K J Rothschild; M S Braiman; T Mogi; L J Stern; H G Khorana
Journal:  FEBS Lett       Date:  1989-07-03       Impact factor: 4.124

6.  Kinetic model of bacteriorhodopsin photocycle: pathway from M state to bR.

Authors:  D S Chernavskii; I V Chizhov; R H Lozier; T M Murina; A M Prokhorov; B V Zubov
Journal:  Photochem Photobiol       Date:  1989-05       Impact factor: 3.421

7.  Aspartic acid-96 is the internal proton donor in the reprotonation of the Schiff base of bacteriorhodopsin.

Authors:  H Otto; T Marti; M Holz; T Mogi; M Lindau; H G Khorana; M P Heyn
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

8.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

Authors:  R Henderson; J M Baldwin; T A Ceska; F Zemlin; E Beckmann; K H Downing
Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

9.  Replacement of aspartic acid-96 by asparagine in bacteriorhodopsin slows both the decay of the M intermediate and the associated proton movement.

Authors:  M Holz; L A Drachev; T Mogi; H Otto; A D Kaulen; M P Heyn; V P Skulachev; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1989-04       Impact factor: 11.205

10.  Aspartic acids 96 and 85 play a central role in the function of bacteriorhodopsin as a proton pump.

Authors:  H J Butt; K Fendler; E Bamberg; J Tittor; D Oesterhelt
Journal:  EMBO J       Date:  1989-06       Impact factor: 11.598

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  31 in total

1.  The M intermediate of Pharaonis phoborhodopsin is photoactive.

Authors:  S P Balashov; M Sumi; N Kamo
Journal:  Biophys J       Date:  2000-06       Impact factor: 4.033

2.  Time-resolved step-scan Fourier transform infrared spectroscopy reveals differences between early and late M intermediates of bacteriorhodopsin.

Authors:  C Rödig; I Chizhov; O Weidlich; F Siebert
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

3.  Characterization of the proton-transporting photocycle of pharaonis halorhodopsin.

Authors:  A Kulcsár; G I Groma; J K Lanyi; G Váró
Journal:  Biophys J       Date:  2000-11       Impact factor: 4.033

4.  Light-induced hydrolysis and rebinding of nonisomerizable bacteriorhodopsin pigment.

Authors:  Amir Aharoni; Michael Ottolenghi; Mordechai Sheves
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

Review 5.  Proton transfer and energy coupling in the bacteriorhodopsin photocycle.

Authors:  J K Lanyi
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

6.  A residue substitution near the beta-ionone ring of the retinal affects the M substates of bacteriorhodopsin.

Authors:  G Váró; L Zimányi; M Chang; B Ni; R Needleman; J K Lanyi
Journal:  Biophys J       Date:  1992-03       Impact factor: 4.033

7.  Localization and orientation of functional water molecules in bacteriorhodopsin as revealed by polarized Fourier transform infrared spectroscopy.

Authors:  M Hatanaka; H Kandori; A Maeda
Journal:  Biophys J       Date:  1997-08       Impact factor: 4.033

8.  In situ determination of transient pKa changes of internal amino acids of bacteriorhodopsin by using time-resolved attenuated total reflection Fourier-transform infrared spectroscopy.

Authors:  C Zscherp; R Schlesinger; J Tittor; D Oesterhelt; J Heberle
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-11       Impact factor: 11.205

9.  pH-dependent transitions in xanthorhodopsin.

Authors:  Eleonora S Imasheva; Sergei P Balashov; Jennifer M Wang; Janos K Lanyi
Journal:  Photochem Photobiol       Date:  2006 Nov-Dec       Impact factor: 3.421

10.  A priori resolution of the intermediate spectra in the bacteriorhodopsin photocycle: the time evolution of the L spectrum revealed.

Authors:  László Zimányi; Jack Saltiel; Leonid S Brown; Janos K Lanyi
Journal:  J Phys Chem A       Date:  2006-02-23       Impact factor: 2.781

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