Literature DB >> 19419763

Plant leaf mass loss and DNA release in freshwater sediments.

John Poté1, Rafaël Ackermann, Walter Wildi.   

Abstract

This work constitutes a part of a wider study examining the degradation and release of plant DNA into the environment. Microcosm studies investigated the kinetics of leaf and DNA content degradation in a specific variety of tomato (Admiro) after incubation in sediments over 30 days at 20, 10, and 4 degrees C. Temperature and microorganisms have been found to play a key role in the decomposition of plant material in freshwater sediment. A two-compartment first-order function fitted well both tomato leaf matter degradation and DNA content mass loss. Genomic analysis indicated that before having been released, an important part of DNA may be degraded inside plant tissues during decomposition in sediments. PCR amplification demonstrated that, after having been released, DNA can both be rapidly adsorbed onto sediment particles and persist as dissolved extracellular DNA in the water column.

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Year:  2009        PMID: 19419763     DOI: 10.1016/j.ecoenv.2009.04.010

Source DB:  PubMed          Journal:  Ecotoxicol Environ Saf        ISSN: 0147-6513            Impact factor:   6.291


  5 in total

Review 1.  Ancient and modern environmental DNA.

Authors:  Mikkel Winther Pedersen; Søren Overballe-Petersen; Luca Ermini; Clio Der Sarkissian; James Haile; Micaela Hellstrom; Johan Spens; Philip Francis Thomsen; Kristine Bohmann; Enrico Cappellini; Ida Bærholm Schnell; Nathan A Wales; Christian Carøe; Paula F Campos; Astrid M Z Schmidt; M Thomas P Gilbert; Anders J Hansen; Ludovic Orlando; Eske Willerslev
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-01-19       Impact factor: 6.237

2.  Persistence of environmental DNA in freshwater ecosystems.

Authors:  Tony Dejean; Alice Valentini; Antoine Duparc; Stéphanie Pellier-Cuit; François Pompanon; Pierre Taberlet; Claude Miaud
Journal:  PLoS One       Date:  2011-08-08       Impact factor: 3.240

3.  Genetically modified crops and aquatic ecosystems: considerations for environmental risk assessment and non-target organism testing.

Authors:  Keri Carstens; Jennifer Anderson; Pamela Bachman; Adinda De Schrijver; Galen Dively; Brian Federici; Mick Hamer; Marco Gielkens; Peter Jensen; William Lamp; Stefan Rauschen; Geoff Ridley; Jörg Romeis; Annabel Waggoner
Journal:  Transgenic Res       Date:  2011-11-26       Impact factor: 2.788

4.  eDNA captures depth partitioning in a kelp forest ecosystem.

Authors:  Keira Monuki; Paul H Barber; Zachary Gold
Journal:  PLoS One       Date:  2021-11-04       Impact factor: 3.240

5.  Horizontal gene transfer from genetically modified plants - Regulatory considerations.

Authors:  Joshua G Philips; Elena Martin-Avila; Andrea V Robold
Journal:  Front Bioeng Biotechnol       Date:  2022-08-31
  5 in total

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