Literature DB >> 19411844

Histone H3-K56 acetylation is important for genomic stability in mammals.

Jian Yuan1, Mintie Pu, Zhiguo Zhang, Zhenkun Lou.   

Abstract

Histone H3 lysine 56 acetylation (H3K56Ac) has recently been identified and shown to be important for genomic stability in yeast. However, whether or not H3K56 acetylation occurs in mammals is not clear. Here, we report that H3K56Ac exists in mammals. Mammalian H3K56Ac requires the histone chaperone Asf1 and occurs mainly at the S phase in unstressed cells. Moreover, SIRT1, which is a mammalian member of sirtuin family of NAD(+)-dependent deacetylases, regulates the deacetylation of H3K56. We further showed that proper H3K56 acetylation is critical for genomic stability and DNA damage response. These results establish the existence and functional significance of H3K56Ac in mammals and identify two regulators of this modification.

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Year:  2009        PMID: 19411844      PMCID: PMC2776713          DOI: 10.4161/cc.8.11.8620

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  34 in total

Review 1.  Translating the histone code.

Authors:  T Jenuwein; C D Allis
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

Review 2.  Histone H3 K56 acetylation, chromatin assembly, and the DNA damage checkpoint.

Authors:  Jessica A Downs
Journal:  DNA Repair (Amst)       Date:  2008-10-23

3.  Identification of human Asf1 chromatin assembly factors as substrates of Tousled-like kinases.

Authors:  H H Silljé; E A Nigg
Journal:  Curr Biol       Date:  2001-07-10       Impact factor: 10.834

4.  Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions.

Authors:  C L White; R K Suto; K Luger
Journal:  EMBO J       Date:  2001-09-17       Impact factor: 11.598

5.  Acetylated lysine 56 on histone H3 drives chromatin assembly after repair and signals for the completion of repair.

Authors:  Chin-Chuan Chen; Joshua J Carson; Jason Feser; Beth Tamburini; Susan Zabaronick; Jeffrey Linger; Jessica K Tyler
Journal:  Cell       Date:  2008-07-25       Impact factor: 41.582

6.  Acetylation of histone H3 lysine 56 regulates replication-coupled nucleosome assembly.

Authors:  Qing Li; Hui Zhou; Hugo Wurtele; Brian Davies; Bruce Horazdovsky; Alain Verreault; Zhiguo Zhang
Journal:  Cell       Date:  2008-07-25       Impact factor: 41.582

7.  SIRT1 redistribution on chromatin promotes genomic stability but alters gene expression during aging.

Authors:  Philipp Oberdoerffer; Shaday Michan; Michael McVay; Raul Mostoslavsky; James Vann; Sang-Kyu Park; Andrea Hartlerode; Judith Stegmuller; Angela Hafner; Patrick Loerch; Sarah M Wright; Kevin D Mills; Azad Bonni; Bruce A Yankner; Ralph Scully; Tomas A Prolla; Frederick W Alt; David A Sinclair
Journal:  Cell       Date:  2008-11-28       Impact factor: 41.582

8.  HST3/HST4-dependent deacetylation of lysine 56 of histone H3 in silent chromatin.

Authors:  Bo Yang; Andrew Miller; Ann L Kirchmaier
Journal:  Mol Biol Cell       Date:  2008-09-17       Impact factor: 4.138

9.  SIRT6 is a histone H3 lysine 9 deacetylase that modulates telomeric chromatin.

Authors:  Eriko Michishita; Ronald A McCord; Elisabeth Berber; Mitomu Kioi; Hesed Padilla-Nash; Mara Damian; Peggie Cheung; Rika Kusumoto; Tiara L A Kawahara; J Carl Barrett; Howard Y Chang; Vilhelm A Bohr; Thomas Ried; Or Gozani; Katrin F Chua
Journal:  Nature       Date:  2008-03-12       Impact factor: 49.962

10.  Impaired DNA damage response, genome instability, and tumorigenesis in SIRT1 mutant mice.

Authors:  Rui-Hong Wang; Kundan Sengupta; Cuiling Li; Hyun-Seok Kim; Liu Cao; Cuiying Xiao; Sangsoo Kim; Xiaoling Xu; Yin Zheng; Beverly Chilton; Rong Jia; Zhi-Ming Zheng; Ettore Appella; Xin Wei Wang; Thomas Ried; Chu-Xia Deng
Journal:  Cancer Cell       Date:  2008-10-07       Impact factor: 31.743

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  108 in total

Review 1.  Histone-modifying enzymes, histone modifications and histone chaperones in nucleosome assembly: Lessons learned from Rtt109 histone acetyltransferases.

Authors:  Jayme L Dahlin; Xiaoyue Chen; Michael A Walters; Zhiguo Zhang
Journal:  Crit Rev Biochem Mol Biol       Date:  2014-11-03       Impact factor: 8.250

2.  Roles for Gcn5 in promoting nucleosome assembly and maintaining genome integrity.

Authors:  Rebecca J Burgess; Zhiguo Zhang
Journal:  Cell Cycle       Date:  2010-08-23       Impact factor: 4.534

Review 3.  The redox basis of epigenetic modifications: from mechanisms to functional consequences.

Authors:  Anthony R Cyr; Frederick E Domann
Journal:  Antioxid Redox Signal       Date:  2011-02-05       Impact factor: 8.401

4.  Catalytic activation of histone acetyltransferase Rtt109 by a histone chaperone.

Authors:  Erin M Kolonko; Brittany N Albaugh; Scott E Lindner; Yuanyuan Chen; Kenneth A Satyshur; Kevin M Arnold; Paul D Kaufman; James L Keck; John M Denu
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-05       Impact factor: 11.205

Review 5.  Histones, histone chaperones and nucleosome assembly.

Authors:  Rebecca J Burgess; Zhiguo Zhang
Journal:  Protein Cell       Date:  2010-07       Impact factor: 14.870

6.  Structural basis for recognition of H3K56-acetylated histone H3-H4 by the chaperone Rtt106.

Authors:  Dan Su; Qi Hu; Qing Li; James R Thompson; Gaofeng Cui; Ahmed Fazly; Brian A Davies; Maria Victoria Botuyan; Zhiguo Zhang; Georges Mer
Journal:  Nature       Date:  2012-02-05       Impact factor: 49.962

7.  Hdac3 is essential for the maintenance of chromatin structure and genome stability.

Authors:  Srividya Bhaskara; Sarah K Knutson; Guochun Jiang; Mahesh B Chandrasekharan; Andrew J Wilson; Siyuan Zheng; Ashwini Yenamandra; Kimberly Locke; Jia-Ling Yuan; Alyssa R Bonine-Summers; Christina E Wells; Jonathan F Kaiser; M Kay Washington; Zhongming Zhao; Florence F Wagner; Zu-Wen Sun; Fen Xia; Edward B Holson; Dineo Khabele; Scott W Hiebert
Journal:  Cancer Cell       Date:  2010-11-16       Impact factor: 31.743

Review 8.  Chromatin regulation and genome maintenance by mammalian SIRT6.

Authors:  Ruth I Tennen; Katrin F Chua
Journal:  Trends Biochem Sci       Date:  2010-08-21       Impact factor: 13.807

9.  Chaperone-mediated acetylation of histones by Rtt109 identified by quantitative proteomics.

Authors:  Nebiyu Abshiru; Kevin Ippersiel; Yong Tang; Hua Yuan; Ronen Marmorstein; Alain Verreault; Pierre Thibault
Journal:  J Proteomics       Date:  2012-10-02       Impact factor: 4.044

10.  Cigarette smoke induces distinct histone modifications in lung cells: implications for the pathogenesis of COPD and lung cancer.

Authors:  Isaac K Sundar; Michael Z Nevid; Alan E Friedman; Irfan Rahman
Journal:  J Proteome Res       Date:  2013-12-13       Impact factor: 4.466

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